RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 EPGNQ6UW88 154 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 TUBA1AQ71U36 451 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 KDM8Q8N371 416 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 GOLGA6L1Q8N7Z2 621 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 PROX1Q92786 737 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 KTI12Q96EK9 354 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-206ENST00000423161 SORCS2Q96PQ0 1159 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 ZNF317Q96PQ6 595 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-206ENST00000423161 KATNB1Q9BVA0 655 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 SEC14L4Q9UDX3 406 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 FKBP7Q9Y680 259 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 STAB1Q9NY15 2570 aa16.1■□□□□ 0.17
SREBF1-206ENST00000423161 A0A096LPE4 126 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 A0A1W2PPZ6 126 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 RNF212BA8MTL3 300 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 ETS2P15036 469 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 ZNF43P17038 809 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 USF1P22415 310 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-206ENST00000423161 SH3BGRP55822 239 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-206ENST00000423161 SNRPD2P62316 118 aaKnown RBP16.09■□□□□ 0.17
SREBF1-206ENST00000423161 C6orf89Q6UWU4 347 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 NFKBIDQ8NI38 313 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-206ENST00000423161 KCNK17Q96T54 332 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 NELFAQ9H3P2 528 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 CA10Q9NS85 328 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 CDC42EP3Q9UKI2 254 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 RCE1Q9Y256 329 aa16.09■□□□□ 0.17
SREBF1-206ENST00000423161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.177e-9■■■□□ 14.7
SREBF1-206ENST00000423161 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-206ENST00000423161 FZD7O75084 574 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 CECR9P0C854 216 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 IGHV4-31P0DP07 118 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 ARAFP10398 606 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 ZNF16P17020 682 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-206ENST00000423161 PRKAR1BP31321 381 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 SERPINF1P36955 418 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 MRPL19P49406 292 aaKnown RBP16.08■□□□□ 0.16
SREBF1-206ENST00000423161 PDLIM4P50479 330 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 NAAAQ02083 359 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 C3orf36Q3SXR2 165 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 FAM69AQ5T7M9 428 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 C5orf46Q6UWT4 87 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 SLC46A3Q7Z3Q1 461 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 SLC38A4Q969I6 547 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 OXGR1Q96P68 337 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 REPIN1Q9BWE0 567 aaKnown RBP16.08■□□□□ 0.16
SREBF1-206ENST00000423161 C12orf10Q9HB07 376 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 TCF7L2Q9NQB0 619 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 SLC25A37Q9NYZ2 338 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 B3GAT1Q9P2W7 334 aa16.08■□□□□ 0.16
SREBF1-206ENST00000423161 CRNNQ9UBG3 495 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-206ENST00000423161 A0A1B0GWA3 101 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 M0R082 166 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 AIM2O14862 343 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 OR2T1O43869 369 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 SLC43A1O75387 559 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 ERLIN1O75477 346 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 ZNF432O94892 652 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 FAM157CP0CG43 387 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 HTR2AP28223 471 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 IL1RL1Q01638 556 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 C1DQ13901 141 aaKnown RBP16.07■□□□□ 0.16
SREBF1-206ENST00000423161 LRIF1Q5T3J3 769 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 GCNT6Q5T4J0 391 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 CYB5R2Q6BCY4 276 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 VHLLQ6RSH7 139 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 COMTD1Q86VU5 262 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 MSRB3Q8IXL7 192 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 GPR137CQ8N3F9 429 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 LSMEM1Q8N8F7 131 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 ZNF417Q8TAU3 575 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 TAAR8Q969N4 342 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 C7orf26Q96N11 449 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 ZNF587Q96SQ5 575 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-206ENST00000423161 VRK1Q99986 396 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-206ENST00000423161 PIMREGQ9BSJ6 248 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 RSPO3Q9BXY4 272 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-206ENST00000423161 SEC61A2Q9H9S3 476 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 MOV10Q9HCE1 1003 aaKnown RBP16.07■□□□□ 0.16
SREBF1-206ENST00000423161 TMEM160Q9NX00 188 aa16.07■□□□□ 0.16
SREBF1-206ENST00000423161 VWC2LB2RUY7 222 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 B9A039 149 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 PDE5AO76074 875 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 IGLV1-44P01699 117 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 HOXB1P14653 301 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-206ENST00000423161 PPIBP23284 216 aaKnown RBP16.06■□□□□ 0.16
SREBF1-206ENST00000423161 GRPRP30550 384 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 CALCRP30988 508 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 LSM11P83369 360 aaKnown RBP eCLIP16.06■□□□□ 0.16
SREBF1-206ENST00000423161 ARF1P84077 181 aaKnown RBP16.06■□□□□ 0.16
SREBF1-206ENST00000423161 GGTLC2Q14390 218 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 ADIPOQQ15848 244 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 ALG10BQ5I7T1 473 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 REEP3Q6NUK4 255 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 DHRS4L2Q6PKH6 230 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 BLOC1S3Q6QNY0 202 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 KRT73Q86Y46 540 aa16.06■□□□□ 0.16
SREBF1-206ENST00000423161 FUNDC1Q8IVP5 155 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms