RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 CDC42P60953 191 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ARHGAP19Q14CB8 494 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 DEFB133Q30KQ1 61 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ZNF311Q5JNZ3 666 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TOMM5Q8N4H5 51 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 FBXO15Q8NCQ5 510 aaPredicted RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 OR2L5Q8NG80 312 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 OR2L8Q8NGY9 312 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 C14orf79Q96F83 325 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TOLLIPQ9H0E2 274 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 MVB12BQ9H7P6 319 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 PELI2Q9HAT8 420 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 P2RX2Q9UBL9 471 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ZNF69Q9UC07 566 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 RDH16O75452 317 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 GKN3PP0CG01 181 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ARAFP10398 606 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 MUC1P15941 1255 aaPredicted RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 GGT2P36268 569 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 LIM2P55344 173 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 RGS8P57771 180 aaPredicted RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 HHEXQ03014 270 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 KRBOX4Q5JUW0 171 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 SEZ6L2Q6UXD5 910 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TCEANCQ8N8B7 351 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ZFP41Q8N8Y5 198 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 BSCL2Q96G97 398 aaPredicted RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 GAL3ST4Q96RP7 486 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 S1PR5Q9H228 398 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 MED9Q9NWA0 146 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TXNDC12O95881 172 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 IL1AP01583 271 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 SCG5P05408 212 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 CRYBB2P43320 205 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
CHRD-204ENST00000420973 RAB4BP61018 213 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TGM3Q08188 693 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 TEX30Q5JUR7 227 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 IDNKQ5T6J7 187 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 MZT2AQ6P582 158 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 LYPD4Q6UWN0 246 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 CASP12Q6UXS9 341 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 ZNF511Q8NB15 262 aa13.37□□□□□ -0.27
CHRD-204ENST00000420973 HELZP42694 1942 aaKnown RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 CASC3O15234 703 aaKnown RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 HCRTR1O43613 425 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 IGF2P01344 180 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TNFP01375 233 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 CD3GP09693 182 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 FAM157BP0CG42 384 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 ZNF658BQ4V348 819 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 MEDAGQ5VYS4 303 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 RAB12Q6IQ22 244 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 OR9A4Q8NGU2 314 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 OPA3Q9H6K4 179 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 MRPL15Q9P015 296 aaKnown RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 EPHA6Q9UF33 1036 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 A0A0A6YYC8 382 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 HYKKA2RU49 373 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 H0YGG7 62 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 I3L1I5 382 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 LDLRAD4O15165 306 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 CLEC3AO75596 197 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 H1F0P07305 194 aaKnown RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 HCKP08631 526 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 DRD1P21728 446 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 AKR1C3P42330 323 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 OR2B8PP59922 312 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 ARF3P61204 181 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 SSPNQ14714 243 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TRMT12Q53H54 448 aaKnown RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 SFRP4Q6FHJ7 346 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 OR5M10Q6IEU7 315 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 ARHGAP11AQ6P4F7 1023 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TMUB2Q71RG4 321 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 KATNB1Q9BVA0 655 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 PPP1R3EQ9H7J1 279 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 ENPP4Q9Y6X5 453 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 COL4A3Q01955 1670 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 HPXP02790 462 aa13.36□□□□□ -0.27
CHRD-204ENST00000420973 TLX1P31314 330 aaPredicted RBP13.36□□□□□ -0.27
CHRD-204ENST00000420973 CCR4P51679 360 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms