RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TPOP07202 933 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 ADORA3P0DMS8 318 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 UQCRC1P31930 480 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 POLR2IP36954 125 aaKnown RBP11.16□□□□□ -0.62
TMEM53-206ENST00000420706 ESRRGP62508 458 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 RPL18Q07020 188 aaKnown RBP11.16□□□□□ -0.62
TMEM53-206ENST00000420706 NPRL3Q12980 569 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 SLC36A3Q495N2 470 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 TMEM225Q6GV28 225 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 ZNF585AQ6P3V2 769 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 FCRLAQ7L513 359 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 SAMD8Q96LT4 415 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 PLA2G12AQ9BZM1 189 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 VCXQ9H320 206 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
TMEM53-206ENST00000420706 ZNF835Q9Y2P0 537 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 ORC6Q9Y5N6 252 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
TMEM53-206ENST00000420706 LOC102725191A0A1B0GVB3 256 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 E9PQ18 207 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 C11orf98E9PRG8 122 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 H3BN98 237 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 CYTIPO60759 359 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 VAMP5O95183 116 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 SYNGR4O95473 234 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 ABOP16442 354 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 CDH2P19022 906 aaPredicted RBP11.15□□□□□ -0.62
TMEM53-206ENST00000420706 AHCYP23526 432 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 POU1F1P28069 291 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 EPHA2P29317 976 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 GIPRP48546 466 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 PUDPQ08623 228 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 PON3Q15166 354 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 SF3B4Q15427 424 aaKnown RBP eCLIP11.15□□□□□ -0.62
TMEM53-206ENST00000420706 TAF11Q15544 211 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 ALG10Q5BKT4 473 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 PLXDC2Q6UX71 529 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 NHLRC1Q6VVB1 395 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 Q6ZPB1 254 aaPredicted RBP11.15□□□□□ -0.62
TMEM53-206ENST00000420706 ST6GALNAC3Q8NDV1 305 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 OR8D4Q8NGM9 314 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 FANK1Q8TC84 345 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 RDH12Q96NR8 316 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 OXGR1Q96P68 337 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 MBOAT4Q96T53 435 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 TSSK6Q9BXA6 273 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 GABARAPL3Q9BY60 117 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 TOR3AQ9H497 397 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 RIBC2Q9H4K1 309 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 B3GAT1Q9P2W7 334 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 IL20RAQ9UHF4 553 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 MCTS1Q9ULC4 181 aaKnown RBP11.15□□□□□ -0.62
TMEM53-206ENST00000420706 RASD1Q9Y272 281 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 BSNQ9UPA5 3926 aa11.15□□□□□ -0.62
TMEM53-206ENST00000420706 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
TMEM53-206ENST00000420706 A0A1W2PNV4 684 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 KDM4EB2RXH2 506 aaPredicted RBP11.14□□□□□ -0.63
TMEM53-206ENST00000420706 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 RNF13O43567 381 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 WDR1O75083 606 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 AQP8O94778 261 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 TGM6O95932 706 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 F13BP05160 661 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 HLA-DOBP13765 273 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 GABRA1P14867 456 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 SLC6A6P31641 620 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 AQP4P55087 323 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 CTXN1P60606 82 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 CDK5Q00535 292 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 RBPJQ06330 500 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 GINS1Q14691 196 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 SLC17A1Q14916 467 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 PTGES3Q15185 160 aaKnown RBP11.14□□□□□ -0.63
TMEM53-206ENST00000420706 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 RTL6Q6ICC9 239 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 DPY19L2P2Q6ZN68 376 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 PXKQ7Z7A4 578 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 CD163Q86VB7 1156 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 IGFN1Q86VF2 1251 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 SLC43A2Q8N370 569 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 FNDC9Q8TBE3 224 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 TEX47Q8TBZ9 253 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 TRIB1Q96RU8 372 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 GPX7Q96SL4 187 aaPredicted RBP11.14□□□□□ -0.63
TMEM53-206ENST00000420706 SF3B5Q9BWJ5 86 aaKnown RBP11.14□□□□□ -0.63
TMEM53-206ENST00000420706 PRRG4Q9BZD6 226 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 GRIP2Q9C0E4 1043 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 CALHM2Q9HA72 323 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 NRIP3Q9NQ35 241 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 INIPQ9NRY2 104 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 TBC1D23Q9NUY8 699 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 FAM118AQ9NWS6 357 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
TMEM53-206ENST00000420706 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms