RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 BTG2P78543 158 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 PLAURQ03405 335 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SF3A2Q15428 464 aaKnown RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 SPHARQ15513 63 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 FAM74A3Q4VXF1 159 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SOWAHCQ53LP3 525 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 CLEC12AQ5QGZ9 265 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CD276Q5ZPR3 534 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 ATRAIDQ6UW56 229 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 SLC16A13Q7RTY0 426 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 ATCAYQ86WG3 371 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 NANOGP1Q8N7R0 232 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 UXS1Q8NBZ7 420 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 PROKR2Q8NFJ6 384 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 OR11H4Q8NGC9 324 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 OR52I1Q8NGK6 324 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 OR4Q3Q8NH05 313 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CLDN23Q96B33 292 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 MMABQ96EY8 250 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 TBC1D17Q9HA65 648 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 PRMT8Q9NR22 394 aaPredicted RBP11.94□□□□□ -0.5
LITAF-203ENST00000413364 KLHL1Q9NR64 748 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 C14orf105Q9NVL8 296 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 ZNF222Q9UK12 451 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
LITAF-203ENST00000413364 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 IRGMA1A4Y4 181 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 KDM4EB2RXH2 506 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 HRKO00198 91 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 CSO75390 466 aaKnown RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 RAB36O95755 333 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DRD5P21918 477 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 GAS1P54826 345 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 FCN2Q15485 313 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SSX1Q16384 188 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 PGGHGQ32M88 737 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 NKAIN2Q5VXU1 208 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 ZC3H14Q6PJT7 736 aaKnown RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 WDR88Q6ZMY6 472 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 CPNE4Q96A23 557 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 DIRAS2Q96HU8 199 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 ZNF559Q9BR84 538 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SPRTNQ9H040 489 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 CLEC4AQ9UMR7 237 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SSR3Q9UNL2 185 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DMRT1Q9Y5R6 373 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 A0A1B0GW55 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 A0A1W2PPC1 479 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 H0YIG0 161 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 CDC42EP2O14613 210 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 PRAMEF2O60811 474 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 IGKV1D-16P01601 117 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SLC2A2P11168 524 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 CD79BP40259 229 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 GPR3P46089 330 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 TAS2R60P59551 318 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 MINDY4Q4G0A6 757 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 KLHL26Q53HC5 615 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 SLC30A6Q6NXT4 461 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 ZNF613Q6PF04 617 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 C3P1Q6ZMU1 363 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 METTL27Q8N6F8 245 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 OR51Q1Q8NH59 317 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 GLYATL2Q8WU03 294 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 TMEM239Q8WW34 195 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 CNOT9Q92600 299 aaKnown RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 HHATLQ9HCP6 504 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
LITAF-203ENST00000413364 MED17Q9NVC6 651 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 LRIT1Q9P2V4 623 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 GPR52Q9Y2T5 361 aa11.93□□□□□ -0.5
LITAF-203ENST00000413364 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 UNC119BA6NIH7 251 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
LITAF-203ENST00000413364 SURF4O15260 269 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 MAOAP21397 527 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 CD1CP29017 333 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 RFX3P48380 749 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 FOXK2Q01167 660 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 FUT7Q11130 342 aa11.92□□□□□ -0.5
LITAF-203ENST00000413364 RAB40BQ12829 278 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms