RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 RBM14Q96PK6 669 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 POTEKPQ9BYX7 375 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FANCFQ9NPI8 374 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 PTTG2Q9NZH5 202 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FBXL2Q9UKC9 423 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF292O60281 2723 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 RIIAD1A6NNX1 92 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 M0R082 166 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 M0R3G1 203 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 OR2T1O43869 369 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 EFNA2O43921 213 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TSPAN9O75954 239 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SNX4O95219 450 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PTHP01270 115 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IFNGP01579 166 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IGHMP01871 453 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IGHA1P01876 353 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 LCKP06239 509 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CD14P08571 375 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 LIFP15018 202 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF3P17036 446 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TGFBR2P37173 567 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CBX5P45973 191 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SOX8P57073 446 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 RPL18Q07020 188 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 B3GNTL1Q67FW5 361 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC16A12Q6ZSM3 486 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MAMDC2Q7Z304 686 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CLVS1Q8IUQ0 354 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 BEST3Q8N1M1 668 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC37A3Q8NCC5 494 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MFSD8Q8NHS3 518 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PTP4A1Q93096 173 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 RNFT2Q96EX2 444 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 THOC3Q96J01 351 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ERMAPQ96PL5 475 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 BCL7BQ9BQE9 202 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 HCAR1Q9BXC0 346 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NMNAT2Q9BZQ4 307 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 RACGAP1Q9H0H5 632 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GPN2Q9H9Y4 310 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MRPL39Q9NYK5 338 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 HAO2Q9NYQ3 351 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TAS2R5Q9NYW4 299 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TNFRSF10DQ9UBN6 386 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF69Q9UC07 566 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 WARS2Q9UGM6 360 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 VDAC3Q9Y277 283 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CFAP54Q96N23 3096 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CNTRLQ7Z7A1 2325 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PRR23D1E9PI22 279 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TRMUO75648 421 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 AHSA1O95433 338 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PRR23D2P0DMB1 279 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 HIST1H1CP16403 213 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 FKBP2P26885 142 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SDHAP31040 664 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 AQP2P41181 271 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 EIF1P41567 113 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MRPS15P82914 257 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZP4Q12836 540 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ITGADQ13349 1161 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 DCTN2Q13561 401 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 DOC2BQ14184 412 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CRMP1Q14194 572 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GGTLC2Q14390 218 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GXYLT1Q4G148 440 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ALG10Q5BKT4 473 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 EMC4Q5J8M3 183 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC35F1Q5T1Q4 408 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PRAMEF20Q5VT98 475 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PLBD1Q6P4A8 553 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 CCDC81Q6ZN84 652 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 MEPCEQ7L2J0 689 aaKnown RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IL22RA1Q8N6P7 574 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SIRT6Q8N6T7 355 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NANOGP1Q8N7R0 232 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 OR5J2Q8NH18 312 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 KIAA1143Q96AT1 154 aaPredicted RBP4.98□□□□□ -1.61
EPHA4-202ENST00000409854 DDIT4LQ96D03 193 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 FER1L6-AS2Q96M78 137 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 COG8Q96MW5 612 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF649Q9BS31 505 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 KATNB1Q9BVA0 655 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 PTGES2Q9H7Z7 377 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TAS2R16Q9NYV7 291 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ENPP5Q9UJA9 477 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 ADAM18Q9Y3Q7 739 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 IER3IP1Q9Y5U9 82 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 TMEM129A0AVI4 362 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NPIPB13A6NJU9 1138 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC22A31A6NKX4 558 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 FAM183AA6NL82 134 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 H3BMQ9 156 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 SLC22A1O15245 554 aa4.98□□□□□ -1.61
EPHA4-202ENST00000409854 GABARAPO95166 117 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms