RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PRAMEF7Q5VXH5 474 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 REP15Q6BDI9 236 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 ACSM5Q6NUN0 579 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 LRP11Q86VZ4 500 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 IL17RDQ8NFM7 739 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 OR4M2Q8NGB6 313 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 NANPQ8TBE9 248 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 FZR1Q9UM11 496 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 CORINQ9Y5Q5 1042 aa14.31□□□□□ -0.12
CHMP3-203ENST00000409225 CFAP73A6NFT4 308 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 RIPK2O43353 540 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 PLPP2O43688 288 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 SEC14L2O76054 403 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 VAMP5O95183 116 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 GSNP06396 782 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 CHRM4P08173 479 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 CCT5P48643 541 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 CLDN17P56750 224 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 EPS8Q12929 822 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 XKR7Q5GH72 579 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 C6orf136Q5SQH8 315 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 AVPI1Q5T686 147 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 ZCCHC23Q6ZST2 131 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 KIF18AQ8NI77 898 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 ZNF837Q96EG3 531 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-203ENST00000409225 C3orf30Q96M34 536 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 ZNF416Q9BWM5 594 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 C1QTNF5Q9BXJ0 243 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 UNKLQ9H9P5 680 aaKnown RBP14.3□□□□□ -0.12
CHMP3-203ENST00000409225 GPR35Q9HC97 309 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 MYEF2Q9P2K5 600 aaKnown RBP14.3□□□□□ -0.12
CHMP3-203ENST00000409225 RASD1Q9Y272 281 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
CHMP3-203ENST00000409225 PRAMEF27A3QJZ7 478 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 RPL36A-HNRNPH2H7BZ11 118 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 FAAHO00519 579 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 FRS3O43559 492 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 RP2O75695 350 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 PRSS23O95084 383 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 FGF4P08620 206 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 NAT2P11245 290 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 G6PDP11413 515 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 UQCRBP14927 111 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 ZFP36P26651 326 aaKnown RBP14.29□□□□□ -0.12
CHMP3-203ENST00000409225 CRHR1P34998 444 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 MVKQ03426 396 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 ZP4Q12836 540 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 PCLAFQ15004 111 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 CEACAM16Q2WEN9 425 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 CMIPQ8IY22 773 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 GSPT2Q8IYD1 628 aaKnown RBP14.29□□□□□ -0.12
CHMP3-203ENST00000409225 KDM8Q8N371 416 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 RNF217Q8TC41 542 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 DUX5Q96PT3 197 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 NTN4Q9HB63 628 aa14.29□□□□□ -0.12
CHMP3-203ENST00000409225 J3QLI3 93 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 TRIM13O60858 407 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 SLC43A1O75387 559 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 CPSF4O95639 269 aaKnown RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 UQCRC2P22695 453 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 FPR2P25090 351 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 MRPS11P82912 194 aaKnown RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 ALKBH6Q3KRA9 238 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 MRPL2Q5T653 305 aaKnown RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 GKAP1Q5VSY0 366 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 TRMT10CQ7L0Y3 403 aaKnown RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 ANKRD46Q86W74 232 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 GPR137CQ8N3F9 429 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 C17orf53Q8N3J3 647 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 CADM2Q8N3J6 435 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 SIGLECL1Q8N7X8 197 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 ANKFN1Q8N957 763 aa14.28□□□□□ -0.12
CHMP3-203ENST00000409225 NOA1Q8NC60 698 aaKnown RBP14.28□□□□□ -0.12
CHMP3-203ENST00000409225 A0A1W2PPW3 197 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 AGAP5A6NIR3 686 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 A8MVM7 634 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 RNASET2O00584 256 aaKnown RBP14.27□□□□□ -0.13
CHMP3-203ENST00000409225 COPEO14579 308 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 CDC14BO60729 498 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF432O94892 652 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 HLA-HP01893 362 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 GKN3PP0CG01 181 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 CD79AP11912 226 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 GLRXP35754 106 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 CHI3L1P36222 383 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-203ENST00000409225 SYPL1Q16563 259 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 GSTA3Q16772 222 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 TRMT5Q32P41 509 aaKnown RBP14.27□□□□□ -0.13
CHMP3-203ENST00000409225 C1orf140Q5VVS0 124 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 SAXO2Q658L1 398 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 RBMS3Q6XE24 437 aaKnown RBP14.27□□□□□ -0.13
CHMP3-203ENST00000409225 ANKK1Q8NFD2 765 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 SLC25A36Q96CQ1 311 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 RAB39BQ96DA2 213 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 SLC38A1Q9H2H9 487 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 DUSP13Q9UII6 198 aa14.27□□□□□ -0.13
CHMP3-203ENST00000409225 WNK2Q9Y3S1 2297 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms