RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ALG8Q9BVK2 526 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 AKIRIN1Q9H9L7 192 aaPredicted RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF304Q9HCX3 659 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 EXOSC3Q9NQT5 275 aaKnown RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 UBQLN4Q9NRR5 601 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 FBXO34Q9NWN3 711 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 ICAM5Q9UMF0 924 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF337Q9Y3M9 751 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 A0A087WUJ7 227 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 NPIPA5A0A0B4J1W7 369 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 FABP12A6NFH5 140 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 C12orf71A8MTZ7 269 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 NPIPA7E9PJI5 369 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 J3QRE1 110 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 SCDO00767 359 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 SNPHO15079 494 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ZGLP1P0C6A0 271 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 NPIPA8P0DM63 369 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 CELP19835 753 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 TBXA2RP21731 343 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 MTNR1BP49286 362 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ACTA2P62736 377 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 RPS25P62851 125 aaKnown RBP11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ACTG2P63267 376 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 HSF2Q03933 536 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 KLHL12Q53G59 568 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 WBP2NLQ6ICG8 309 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 LCN10Q6JVE6 187 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM131AQ6UXB0 335 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF517Q6ZMY9 492 aaPredicted RBP11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 DPY19L2P2Q6ZN68 376 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 MEX3DQ86XN8 651 aaKnown RBP11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC37A3Q8NCC5 494 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 SIMC1Q8NDZ2 872 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 GRHL3Q8TE85 626 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 NACC2Q96BF6 587 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 DIRAS2Q96HU8 199 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 YIPF2Q9BWQ6 316 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 LUZP4Q9P127 313 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 ERVK-19Q9WJR5 959 aa11.75□□□□□ -0.53
SMARCB1-203ENST00000407082 CRYBG3Q68DQ2 2970 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 GTPBP1O00178 669 aaKnown RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 WWP2O00308 870 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 GABRPO00591 440 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 SOCS6O14544 535 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 IMPA2O14732 288 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 RNF13O43567 381 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TMCC2O75069 709 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TMEM127O75204 238 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 IL33O95760 270 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 CD1AP06126 327 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 FBLP22087 321 aaKnown RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 MYL9P24844 172 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 GTF2E2P29084 291 aaKnown RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 SSTR4P31391 388 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 PGDP52209 483 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 FABP5Q01469 135 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 MXD1Q05195 221 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 CRYZQ08257 329 aaKnown RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 IL10RAQ13651 578 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 INPP5JQ15735 1006 aaPredicted RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 C1QL3Q5VWW1 255 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 HLA-DQA1Q5Y7H0 255 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 WDR88Q6ZMY6 472 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 CADM2Q8N3J6 435 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF615Q8N8J6 731 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 ZBTB8BQ8NAP8 495 aaPredicted RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 OR13C2Q8NGS9 318 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 C16orf52Q8NHV5 167 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 NEIL3Q8TAT5 605 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 ASB15Q8WXK1 588 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TM9SF4Q92544 642 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TMEM203Q969S6 136 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 PTCHD1Q96NR3 888 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TMEM43Q9BTV4 400 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 TPK1Q9H3S4 243 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 ATP13A2Q9NQ11 1180 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 FLRT3Q9NZU0 649 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 RABL2AQ9UBK7 228 aaPredicted RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 RABL2BQ9UNT1 228 aa11.74□□□□□ -0.53
SMARCB1-203ENST00000407082 FBN2P35556 2912 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 A0A1W2PQL4 384 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 FRG2CA6NGY1 282 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR6C76A6NM76 312 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 C17orf105B2RV13 164 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 C9J4A7 227 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ARPC3O15145 178 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 OR7A10O76100 309 aa11.73□□□□□ -0.53
SMARCB1-203ENST00000407082 ONECUT2O95948 504 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms