RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MAPK11Q15759 364 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SYPL1Q16563 259 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SLC9B1Q4ZJI4 515 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZCCHC23Q6ZST2 131 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 LRRC17Q8N6Y2 441 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PMM1Q92871 262 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF317Q96PQ6 595 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SUCNR1Q9BXA5 334 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 TXLNGYQ9BZA5 131 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PIF1Q9H611 641 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF665Q9H7R5 613 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CRLF2Q9HC73 371 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 RLIMQ9NVW2 624 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 B3GAT1Q9P2W7 334 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZDHHC2Q9UIJ5 367 aa10.17□□□□□ -0.78
SPTLC1P3-201ENST00000403408 AGAP5A6NIR3 686 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 DUXAA6NLW8 204 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 TMEM114B3SHH9 223 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FTCDNL1E5RQL4 147 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 M0R233 179 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 HMGN4O00479 90 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FAAHO00519 579 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 LYPLA1O75608 230 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 MPZL1O95297 269 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 HLA-HP01893 362 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 GPIP06744 558 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FAM153BP0C7A2 387 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 GKN3PP0CG01 181 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF14P17017 642 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 RPS4Y1P22090 263 aaKnown RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CRHR1P34998 444 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 RBMXP38159 391 aaKnown RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 RPL3P39023 403 aaKnown RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 HTR3AP46098 478 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 EVX1P49640 407 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 TMEM33P57088 247 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SRSF4Q08170 494 aaKnown RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FOXL1Q12952 345 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FXNQ16595 210 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CEACAM16Q2WEN9 425 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PGS1Q32NB8 556 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ALKBH6Q3KRA9 238 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 FAM153CQ494X1 144 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SAXO2Q658L1 398 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 HIST2H2BDQ6DRA6 164 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ABHD12BQ7Z5M8 362 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ANKRD46Q86W74 232 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SIGLECL1Q8N7X8 197 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 BHLHE22Q8NFJ8 381 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 AGR3Q8TD06 166 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PPP3R2Q96LZ3 170 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 TSPAN32Q96QS1 320 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 JMJD8Q96S16 334 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PTDSS2Q9BVG9 487 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 POLE3Q9NRF9 147 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ATAD3AQ9NVI7 634 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ADPRHL2Q9NX46 363 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ARMCX1Q9P291 453 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PSMC3IPQ9P2W1 217 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CHST2Q9Y4C5 530 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CACNG2Q9Y698 323 aa10.16□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PRSS23O95084 383 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 GSNP06396 782 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PRG2P13727 222 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 PRPS1L1P21108 318 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ARR3P36575 388 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CLDN17P56750 224 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 MVKQ03426 396 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CCDC153Q494R4 210 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 MRPL2Q5T653 305 aaKnown RBP10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 TMEM225Q6GV28 225 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 ACSM5Q6NUN0 579 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 BCL6BQ8N143 479 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 OR4A15Q8NGL6 344 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 OIT3Q8WWZ8 545 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 GTF3AQ92664 365 aaKnown RBP10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 MECRQ9BV79 373 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 EXD2Q9NVH0 621 aa10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 SOX21Q9Y651 276 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1P3-201ENST00000403408 CFAP73A6NFT4 308 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ZNF500O60304 480 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CDC14BO60729 498 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CLPTM1O96005 669 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 IGHV2-5P01817 119 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 SHBGP04278 402 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 NUDT17P0C025 328 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PNMTP11086 282 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 PAX7P23759 505 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 ALDH3A1P30838 453 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 GLRXP35754 106 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 AQP5P55064 265 aa10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 SH3BGRP55822 239 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1P3-201ENST00000403408 CLDN8P56748 225 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms