RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SPNP16150 400 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 EMP2P54851 167 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 BDH1Q02338 343 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 TNK1Q13470 666 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 OR4Q3Q8NH05 313 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 LTB4R2Q9NPC1 389 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 NOX4Q9NPH5 578 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 FBXL4Q9UKA2 621 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 B3GALT1Q9Y5Z6 326 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 GPR137BO60478 399 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 ETV5P41161 510 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 UNQ6126/PRO20091Q6UXV3 157 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 SLCO4C1Q6ZQN7 724 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 RTN4RL1Q86UN2 441 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-203ENST00000391813 PGBD5Q8N414 524 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 TMEM106AQ96A25 262 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 GAREM1Q9H706 876 aa18.28■□□□□ 0.52
SHANK1-203ENST00000391813 SNRPGP15A8MWD9 76 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SCO1O75880 301 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 GJA4P35212 333 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 KIR2DL3P43628 341 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 BCDIN3DQ7Z5W3 292 aaKnown RBP18.27■□□□□ 0.52
SHANK1-203ENST00000391813 C14orf79Q96F83 325 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 OR2A14Q96R47 310 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 CXorf36Q9H7Y0 433 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 RLIMQ9NVW2 624 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 KCNS2Q9ULS6 477 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 TAPBPO15533 448 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SBK3P0C264 359 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SRP9P49458 86 aaKnown RBP18.27■□□□□ 0.52
SHANK1-203ENST00000391813 FIGLAQ6QHK4 219 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 PLXDC1Q8IUK5 500 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 ZSCAN4Q8NAM6 433 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-203ENST00000391813 OR13C2Q8NGS9 318 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 WDR77Q9BQA1 342 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-203ENST00000391813 OR52A5Q9H2C5 316 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 PLEKHJ1Q9NW61 149 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 MUTYHQ9UIF7 546 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SGK494L7N484 410 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SOCS6O14544 535 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 YIPF5Q969M3 257 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 SLAMF9Q96A28 289 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 NMNAT2Q9BZQ4 307 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 FBXO7Q9Y3I1 522 aa18.27■□□□□ 0.52
SHANK1-203ENST00000391813 A0A1B0GUH1 482 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 RAD1O60671 282 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 NME2P22392 152 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 RPL23AP62750 156 aaKnown RBP18.27■□□□□ 0.51
SHANK1-203ENST00000391813 OR6M1Q8NGM8 313 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 RAB39BQ96DA2 213 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 WDFY2Q96P53 400 aa18.27■□□□□ 0.51
SHANK1-203ENST00000391813 CIB4A0PJX0 185 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 F11P03951 625 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 FXYD4P59646 89 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 HIST2H3AQ71DI3 136 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 RDH10Q8IZV5 341 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 OR5T1Q8NG75 326 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 UCN3Q969E3 161 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 UBQLN3Q9H347 655 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ACKR4Q9NPB9 350 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 GPATCH2Q9NW75 528 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 NPIPA2E9PIF3 369 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 NPIPA3F8WFD2 350 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ACSM1Q08AH1 577 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 LSMEM1Q8N8F7 131 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 OR52H1Q8NGJ2 320 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 MED20Q9H944 212 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 LIN7BQ9HAP6 207 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 C1orf123Q9NWV4 160 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 A8MXE2 369 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 OR8G3PP0DMU2 310 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ZP3P21754 424 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 HTR2CP28335 458 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 CTSCP53634 463 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 FOXK2Q01167 660 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 CRMP1Q14194 572 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 LYSMD4Q5XG99 296 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ANKRD34AQ69YU3 496 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 TRAPPC6BQ86SZ2 158 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 LFNGQ8NES3 379 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 DOK4Q8TEW6 326 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ZFYVE21Q9BQ24 234 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 UBR3Q6ZT12 1888 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 SURF4O15260 269 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 KLK8O60259 260 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 KIAA0141Q14154 515 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-203ENST00000391813 SLC9A3R2Q15599 337 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ADAM5Q6NVV9 412 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 KCNIP4Q6PIL6 250 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 DPPA4Q7L190 304 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 OR6T1Q8NGN1 323 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 ELOVL3Q9HB03 270 aa18.26■□□□□ 0.51
SHANK1-203ENST00000391813 TO15178 435 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 CALCBP10092 127 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PLP2Q04941 152 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 SERTAD2Q14140 314 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PRAMEF8Q5VWM4 474 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 PRAMEF7Q5VXH5 474 aa18.25■□□□□ 0.51
SHANK1-203ENST00000391813 TANGO2Q6ICL3 276 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms