RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 KIF26AQ9ULI4 1882 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NPIPA5E9PKD4 350 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NPIPA3F8WFD2 350 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 AP4M1O00189 453 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC25A4P12235 298 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CYBAP13498 195 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NCK1P16333 377 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RPL13AP40429 203 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 EVX1P49640 407 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 HIST1H3AP68431 136 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 Q499Y3 187 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 MIDNQ504T8 468 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PKDCCQ504Y2 493 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF628Q5EBL2 1059 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DPPA2Q7Z7J5 298 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ANGPTL5Q86XS5 388 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NRMQ8IXM6 262 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CCDC116Q8IYX3 515 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 LINC00469Q8N7U9 141 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CREB3L4Q8TEY5 395 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NKD1Q969G9 470 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NEURL3Q96EH8 262 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 OR2A14Q96R47 310 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SMG9Q9H0W8 520 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 MARCH5Q9NX47 278 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NPIPA1Q9UND3 350 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RNF11Q9Y3C5 154 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DNAJC15Q9Y5T4 150 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ARFGEF3Q5TH69 2177 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TEX13DA0A0J9YY54 714 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TCRBV7S2A1N4TA0A589 114 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF98A6NK75 572 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF705EA8MWA4 302 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 EMC8O43402 210 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 FBLP22087 321 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CHIT1Q13231 466 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CYP27C1Q4G0S4 372 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 FBXO48Q5FWF7 155 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SPIN3Q5JUX0 258 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 LIPKQ5VXJ0 399 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GLDNQ6ZMI3 551 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DTWD2Q8NBA8 298 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GOT1L1Q8NHS2 421 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM234Q8WY98 164 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ANAPC16Q96DE5 110 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GAL3ST2Q9H3Q3 398 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PLEKHA3Q9HB20 300 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC35A3Q9Y2D2 325 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 C1orf226A1L170 272 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CTDSP2O14595 271 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF207O43670 478 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GALTP07902 379 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GUSBP08236 651 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 BSGP35613 385 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RPS24P62847 133 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PLP2Q04941 152 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TSPAN31Q12999 210 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 MANEAQ5SRI9 462 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NOXRED1Q6NXP6 359 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF546Q86UE3 836 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NXPE1Q8N323 547 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC5A8Q8N695 610 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NANOGP1Q8N7R0 232 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TRMT10AQ8TBZ6 339 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 M1APQ8TC57 530 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NAT6Q93015 286 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RPUSD4Q96CM3 377 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 KCNA7Q96RP8 456 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PKMYT1Q99640 499 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TXNL4BQ9NX01 149 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DHDHQ9UQ10 334 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PTPRFP10586 1907 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ONECUT3O60422 494 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GOT2P00505 430 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CEBPBP17676 345 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ARG2P78540 354 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC30A6Q6NXT4 461 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF765Q7L2R6 523 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF610Q8N9Z0 462 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 BVESQ8NE79 360 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 OR2A12Q8NGT7 310 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 LRRC15Q8TF66 581 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TANKQ92844 425 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CMSS1Q9BQ75 279 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CPPED1Q9BRF8 314 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GPR61Q9BZJ8 451 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GPR83Q9NYM4 423 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC6A14Q9UN76 642 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NCOR2Q9Y618 2525 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DOCK9Q9BZ29 2069 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF878C9JN71 531 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SULT2B1O00204 365 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DDCP20711 480 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 APEX1P27695 318 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 EVI2BP34910 448 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 DAOAP59103 153 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC35G1Q2M3R5 365 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms