RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PFDN2Q9UHV9 154 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 HHLA2Q9UM44 414 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 V9GY05 133 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NINQ8N4C6 2090 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A1W2PPC1 479 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM212A6NML5 194 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 DISC1C4P0D8 188 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MTRF1O75570 445 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 EML2O95834 649 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IGFBP1P08833 259 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IFI6P09912 130 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TGM1P22735 817 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PEBP1P30086 187 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SUMO3P55854 103 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC35A1P78382 337 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CDK5Q00535 292 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 POU3F1Q03052 451 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TPBGQ13641 420 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ARL6IP1Q15041 203 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SF3A2Q15428 464 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IL20RBQ6UXL0 311 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF767PQ75MW2 155 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 C10orf111Q8N326 155 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 OR5H6Q8NGV6 325 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ELP5Q8TE02 316 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 AKAP1Q92667 903 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MSLNLQ96KJ4 702 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF587Q96SQ5 575 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GAL3ST1Q99999 423 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 C7orf50Q9BRJ6 194 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 POTEKPQ9BYX7 375 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CHIAQ9BZP6 476 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NXF5Q9H1B4 397 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ALKBH4Q9NXW9 302 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 RDH8Q9NYR8 311 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ATXN7L1Q9ULK2 861 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NTNG1Q9Y2I2 539 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TRAV6A0A075B6T7 132 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 IGHV5-51A0A0C4DH38 117 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NAP1L6A6NFF2 107 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PSMD9O00233 223 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 LYRM1O43325 122 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MAS1P04201 325 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZGLP1P0C6A0 271 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 LINC00271P0C7V0 271 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PTBP1P26599 531 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ETV5P41161 510 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ETV1P50549 477 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF81P51508 661 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ACTBP60709 375 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ACTG1P63261 375 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TRA2AQ13595 282 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SMCO1Q147U7 214 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NTRK2Q16620 822 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TMEM201Q5SNT2 666 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 OR5M10Q6IEU7 315 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TCEAL6Q6IPX3 200 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 VASH1Q7L8A9 365 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SLC16A9Q7RTY1 509 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CPEB2Q7Z5Q1 589 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SYS1Q8N2H4 156 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 SIMC1Q8NDZ2 872 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 RNASE11Q8TAA1 199 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 TTC9Q92623 222 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 GHSRQ92847 366 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 FOXRED1Q96CU9 486 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ZNF681Q96N22 645 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 NRSN2Q9GZP1 204 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ATG5Q9H1Y0 275 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ERVMER34-1Q9H9K5 563 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 FAM60AQ9NP50 221 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 KLHL9Q9P2J3 617 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 KLF15Q9UIH9 416 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 BOKQ9UMX3 212 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 RASD1Q9Y272 281 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 PLEKHA6Q9Y2H5 1048 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 MRPS2Q9Y399 296 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 CNTRLQ7Z7A1 2325 aa4.88□□□□□ -1.63
SMNDC1-202ENST00000369603 ANKRD36A6QL64 1941 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SEC16AO15027 2179 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A0B4J2E0 115 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 IGKV1-8A0A0C4DH67 115 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 A0A1B0GX12 115 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 KDM4EB2RXH2 506 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SYT7O43581 403 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 ICMTO60725 284 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 EIF1BO60739 113 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CELA2BP08218 269 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 RAB40ALP0C0E4 278 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 TBXA2RP21731 343 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 SDHAP31040 664 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 PSMB10P40306 273 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CSNK1A1P48729 337 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 DIO1P49895 249 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CDK10Q15131 360 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
SMNDC1-202ENST00000369603 HLA-BQ31612 363 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms