RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CBY3A6NI87 242 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ZNF814B7Z6K7 855 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 FBP2O00757 339 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 TO15178 435 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SLC22A2O15244 555 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ACOX3O15254 700 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 CFLARO15519 480 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 EMC8O43402 210 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SLC25A17O43808 307 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 HS6ST1O60243 411 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ZG16O60844 167 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 BCAS2O75934 225 aaPredicted RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 CPSF4O95639 269 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 P04436 131 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ABCB1P08183 1280 aaPredicted RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 CT45A8P0DMV1 189 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 CT45A9P0DMV2 189 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 PRF1P14222 555 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 DRD5P21918 477 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 TNFSF8P32971 234 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 TMED10P49755 219 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 PPIAP62937 165 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 DCTN2Q13561 401 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 TAF11Q15544 211 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 C3AR1Q16581 482 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 CT45A2Q5DJT8 189 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 C6orf163Q5TEZ5 329 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ANXA8L1Q5VT79 327 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SAXO2Q658L1 398 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ZNF626Q68DY1 528 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ARHGAP11AQ6P4F7 1023 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 DLEU7Q6UYE1 221 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 TMEM64Q6YI46 380 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 GPAT4Q86UL3 456 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 FJX1Q86VR8 437 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SLC22A16Q86VW1 577 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 DOLPP1Q86YN1 238 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 MSRB3Q8IXL7 192 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 OR10G3Q8NGC4 313 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 OR4A15Q8NGL6 344 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 OR5AK3PQ8NH89 298 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SFXN5Q8TD22 340 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 PHF10Q8WUB8 498 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 ITLN2Q8WWU7 325 aaPredicted RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 MSI2Q96DH6 328 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 MAGED4Q96JG8 741 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 BTBD9Q96Q07 612 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 GAL3ST4Q96RP7 486 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 CHCHD6Q9BRQ6 235 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 LMF2Q9BU23 707 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 ITPAQ9BY32 194 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 NXF5Q9H1B4 397 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 FOLH1BQ9HBA9 442 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 KRT84Q9NSB2 600 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 DDX18Q9NVP1 670 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 QPCTLQ9NXS2 382 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 SLC25A37Q9NYZ2 338 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 BCAP29Q9UHQ4 241 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ARL2BPQ9Y2Y0 163 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 KLF2Q9Y5W3 355 aaPredicted RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 CAPN7Q9Y6W3 813 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 ANKHD1Q8IWZ3 2542 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 INTS1Q8N201 2190 aaKnown RBP6.99□□□□□ -1.29
YBX3-204ENST00000366290 TACC2O95359 2948 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 CELSR1Q9NYQ6 3014 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 TRGV8A0A0C4DH27 118 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 RNF103-CHMP3A0A140T963 221 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 FRG2CA6NGY1 282 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 FXYD1O00168 92 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 CCL21O00585 134 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 TP53I11O14683 189 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 CCDC22O60826 627 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 TRIM3O75382 744 aaPredicted RBP6.98□□□□□ -1.29
YBX3-204ENST00000366290 SNX4O95219 450 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 ZCCHC18P0CG32 403 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 ACP2P11117 423 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 RFC3P40938 356 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 PPICP45877 212 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 TRPC1P48995 793 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 CCT3P49368 545 aaKnown RBP6.98□□□□□ -1.29
YBX3-204ENST00000366290 NR0B1P51843 470 aaKnown RBP6.98□□□□□ -1.29
YBX3-204ENST00000366290 SNTA1Q13424 505 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 ART3Q13508 389 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 LASP1Q14847 261 aaKnown RBP6.98□□□□□ -1.29
YBX3-204ENST00000366290 NNATQ16517 81 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 MTX3Q5HYI7 312 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 LRIF1Q5T3J3 769 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 MORN5Q5VZ52 161 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 FAM91A1Q658Y4 838 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 MFSD12Q6NUT3 480 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 SNX32Q86XE0 403 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 ZDHHC23Q8IYP9 409 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 SLC34A3Q8N130 599 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 EID3Q8N140 333 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 C10orf111Q8N326 155 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 TMEM251Q8N6I4 163 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 FAM57AQ8TBR7 257 aa6.98□□□□□ -1.29
YBX3-204ENST00000366290 SPPL2AQ8TCT8 520 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms