RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PLET1Q6UQ28 207 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 PAMR1Q6UXH9 720 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 GRAMD2AQ8IUY3 354 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 ZNF527Q8NB42 609 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.45
UBA3-201ENST00000349511 ZNF524Q96C55 264 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 ZC3HAV1LQ96H79 300 aaKnown RBP12.21□□□□□ -0.45
UBA3-201ENST00000349511 COQ7Q99807 217 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.45
UBA3-201ENST00000349511 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 SOCS6O14544 535 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TO15178 435 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 KLF4O43474 513 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 OR2J2O76002 312 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 GAAP10253 952 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 UBL4AP11441 157 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 PSKH1P11801 424 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TBXA2RP21731 343 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 F8A1P23610 371 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 HTR1FP30939 366 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 NRG3P56975 720 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TMEM44Q2T9K0 475 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 ALG10BQ5I7T1 473 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TMEM164Q5U3C3 297 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 VASNQ6EMK4 673 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MBOAT2Q6ZWT7 520 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 KLBQ86Z14 1044 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 DNAJA4Q8WW22 397 aaPredicted RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 RELTQ969Z4 430 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 SECISBP2Q96T21 854 aaKnown RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 ZNF559Q9BR84 538 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TEX12Q9BXU0 123 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 NDEL1Q9GZM8 345 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 RNF32Q9H0A6 362 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 TCFL5Q9UL49 500 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 CDC42EP2O14613 210 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 LYPD3O95274 346 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 GUSBP08236 651 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 FAM157BP0CG42 384 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 PRKAR1AP10644 381 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 COX6A1P12074 109 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 ATP6V1E1P36543 226 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 FNDC7Q5VTL7 733 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 BICRALQ6AI39 1079 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MZT2BQ6NZ67 158 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MZT2AQ6P582 158 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 DUSP18Q8NEJ0 188 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 OR11G2Q8NGC1 345 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 OR52N1Q8NH53 320 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TMEM43Q9BTV4 400 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 DDA1Q9BW61 102 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 DEFB126Q9BYW3 111 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 TBL1XR1Q9BZK7 514 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 ZNF160Q9HCG1 818 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 ASB6Q9NWX5 421 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 H2AFY2Q9P0M6 372 aaPredicted RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 POLHQ9Y253 713 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 ALG5Q9Y673 324 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MRPS18BQ9Y676 258 aaKnown RBP12.2□□□□□ -0.46
UBA3-201ENST00000349511 CNTRLQ7Z7A1 2325 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 MPDZO75970 2070 aa12.2□□□□□ -0.46
UBA3-201ENST00000349511 A0A0B4J2E0 115 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 A0A1B0GX12 115 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 DVL2O14641 736 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 ZNF264O43296 627 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 LYRM1O43325 122 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 HCRTR2O43614 444 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 NDUFB5O43674 189 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 ZFAND5O76080 213 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBA3-201ENST00000349511 ZNF322Q6U7Q0 402 aaPredicted RBP12.19□□□□□ -0.46
UBA3-201ENST00000349511 TMEM91Q6ZNR0 172 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 ZNF550Q7Z398 422 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 SIRT6Q8N6T7 355 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 YIPF7Q8N8F6 280 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 OTULINQ96BN8 352 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 DNAJA3Q96EY1 480 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 PRRX2Q99811 253 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 ZPBPQ9BS86 351 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 DPH1Q9BZG8 443 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 SPRY4Q9C004 299 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 ISG20L2Q9H9L3 353 aaKnown RBP12.19□□□□□ -0.46
UBA3-201ENST00000349511 NLKQ9UBE8 527 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 MYOTQ9UBF9 498 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 TNFRSF10DQ9UBN6 386 aa12.19□□□□□ -0.46
UBA3-201ENST00000349511 RPS6KB2Q9UBS0 482 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms