RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 C11orf98E9PRG8 122 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 H0YJX3 145 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 H3BN98 237 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 HLA-DOBP13765 273 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 GTF2E2P29084 291 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 MLLT10P55197 1068 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 NUP107P57740 925 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 CSNK2A1P68400 391 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 ADARB1P78563 741 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 NFATC3Q12968 1075 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 MFSD13AQ14CX5 517 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 ZNF239Q16600 458 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 KRTCAP3Q53RY4 240 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 C6orf52Q5T4I8 152 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 ARHGAP11AQ6P4F7 1023 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 GHDCQ8N2G8 530 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 SCAIQ8N9R8 606 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 LSM14AQ8ND56 463 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 RDH12Q96NR8 316 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 BBC3Q96PG8 261 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 TSSK6Q9BXA6 273 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 GRIP2Q9C0E4 1043 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 PNPLA3Q9NST1 481 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 FAM118AQ9NWS6 357 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 B3GAT1Q9P2W7 334 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 AQP7P3A6NL99 342 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 ZAR1LA6NP61 321 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 NDUFB2O95178 105 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 RCBTB2O95199 551 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 F13BP05160 661 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 ADORA3P0DMS8 318 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 ESRRGP62508 458 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 PTGES3Q15185 160 aaKnown RBP16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 EMC4Q5J8M3 183 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 ACSM5Q6NUN0 579 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 PAQR6Q6TCH4 344 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 NHLRC1Q6VVB1 395 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 SARAFQ96BY9 339 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 TBC1D23Q9NUY8 699 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 KLHL13Q9P2N7 655 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 SHANK1Q9Y566 2161 aa16.98■□□□□ 0.31
CHMP4A-201ENST00000347519 ATXN7O15265 892 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 PPP1R3DO95685 299 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 CLIC3O95833 236 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 CDK5Q00535 292 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 ZP4Q12836 540 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 GINS1Q14691 196 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 ALG10Q5BKT4 473 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 PDSS1Q5T2R2 415 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 CCDC71Q8IV32 467 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 WDFY1Q8IWB7 410 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 DHRSXQ8N5I4 330 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 ADPRHL1Q8NDY3 354 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 TEX47Q8TBZ9 253 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 CYGBQ8WWM9 190 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 ZNF570Q96NI8 536 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 ADI1Q9BV57 179 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 B3GALT5Q9Y2C3 310 aa16.97■□□□□ 0.31
CHMP4A-201ENST00000347519 OR14I1A6ND48 311 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 CLCA1A8K7I4 914 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 BHLHE40O14503 412 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 DNPH1O43598 174 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 SERPINI2O75830 405 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 PLGP00747 810 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 CDH2P19022 906 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 AHCYP23526 432 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 PTGS2P35354 604 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 GIPRP48546 466 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 CTXN1P60606 82 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 RPS3AP61247 264 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 ERVK-25P63136 954 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 PUDPQ08623 228 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 ANKDD1AQ495B1 522 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 FNDC9Q8TBE3 224 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 TFAP2CQ92754 450 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 ZNF184Q99676 751 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 NAA11Q9BSU3 229 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 SLC25A19Q9HC21 320 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 ADAM18Q9Y3Q7 739 aa16.96■□□□□ 0.31
CHMP4A-201ENST00000347519 ZGRF1Q86YA3 2104 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 LOC100130705A0A1B0GUX0 176 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 A0A1W2PNV4 684 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 M0R129 80 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC16A6O15403 523 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 RNF13O43567 381 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 EIF1BO60739 113 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 AQP8O94778 261 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 OR6A2O95222 327 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 TGM6O95932 706 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 GNAO1P09471 354 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC6A6P31641 620 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 CAPGP40121 348 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 PRPS1P60891 318 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 PON3Q15166 354 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 PGGHGQ32M88 737 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 WLSQ5T9L3 541 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 SLX4IPQ5VYV7 408 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 ABLIM2Q6H8Q1 611 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 ADGRE4PQ86SQ3 457 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms