RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MFSD12Q6NUT3 480 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 RPL22L1Q6P5R6 122 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 CMASQ8NFW8 434 aaPredicted RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 RIMS1Q86UR5 1692 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ATRNL1Q5VV63 1379 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 TCRBV21S2A2A0A5A6 115 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 DIO3P55073 304 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 NPSR1Q6W5P4 371 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ADGRG5Q8IZF4 528 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR52B6Q8NGF0 335 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ATRNO75882 1429 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 H2AFB1P0C5Y9 115 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 CNR2P34972 360 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 CSNK1G2P78368 415 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 GPR18Q14330 331 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 ETFRF1Q6IPR1 90 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 HUS1BQ8NHY5 278 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 PRAMEF4O60810 478 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 F3P13726 295 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 SLC29A1Q99808 456 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 GSRP00390 522 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 FLT3LGP49771 235 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 INIPQ9NRY2 104 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 LAMTOR5O43504 91 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 ACSM4P0C7M7 580 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 WNT7BP56706 349 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 DCAF4L2Q8NA75 395 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 TCTN2Q96GX1 697 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 KRBA1A5PL33 1030 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 RNGTTO60942 597 aaKnown RBP16.48■□□□□ 0.23
SMAD4-201ENST00000342988 SULT1C4O75897 302 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 BAK1Q16611 211 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 NDUFAF7Q7L592 441 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 GRAMD2AQ8IUY3 354 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 HSD17B11Q8NBQ5 300 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 ARFGEF3Q5TH69 2177 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 YJEFN3A6XGL0 299 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 ABCD4O14678 606 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 TAAR5O14804 337 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 SLC43A1O75387 559 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 PTGIRP43119 386 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 SPCS2Q15005 226 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 THEM4Q5T1C6 240 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 AAMDCQ9H7C9 122 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 METTL17Q9H7H0 456 aaPredicted RBP16.48■□□□□ 0.23
SMAD4-201ENST00000342988 TPMTP51580 245 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 VHLLQ6RSH7 139 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 OR2G3Q8NGZ4 309 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 GABRQQ9UN88 632 aa16.48■□□□□ 0.23
SMAD4-201ENST00000342988 C5orf52A6NGY3 159 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 CRISP2P16562 243 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 P2RY14Q15391 338 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 FAM110CQ1W6H9 321 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 OR2T6Q8NHC8 308 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 LAMP3Q9UQV4 416 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 RCCD1A6NED2 376 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 BCL6P41182 706 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 C1orf127Q8N9H9 656 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
SMAD4-201ENST00000342988 C12orf10Q9HB07 376 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 CYC1P08574 325 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 FOXN2P32314 431 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 RRADP55042 308 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 SMAGPQ0VAQ4 97 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 LTC4SQ16873 150 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 OR6V1Q8N148 313 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 ATP13A2Q9NQ11 1180 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 MYO5AQ9Y4I1 1855 aaKnown RBP16.47■□□□□ 0.23
SMAD4-201ENST00000342988 TSEN54Q7Z6J9 526 aaKnown RBP16.47■□□□□ 0.23
SMAD4-201ENST00000342988 MMP21Q8N119 569 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 KCNG3Q8TAE7 436 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 DUSP23Q9BVJ7 150 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 KCNK12Q9HB15 430 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 NOSIPQ9Y314 301 aaKnown RBP16.47■□□□□ 0.23
SMAD4-201ENST00000342988 LGALS8O00214 317 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 AHSGP02765 367 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 OPRL1P41146 370 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 RFX2P48378 723 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 STACQ99469 402 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 CXCR4P61073 352 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 DUSP6Q16828 381 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 ATP5SQ99766 215 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 SELEP16581 610 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 EID2Q8N6I1 236 aa16.47■□□□□ 0.23
SMAD4-201ENST00000342988 H1FXQ92522 213 aaKnown RBP16.47■□□□□ 0.23
SMAD4-201ENST00000342988 PTAFRP25105 342 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 OR10G3Q8NGC4 313 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 GNPNAT1Q96EK6 184 aaPredicted RBP16.46■□□□□ 0.23
SMAD4-201ENST00000342988 CABLES2Q9BTV7 478 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 UMAD1C9J7I0 102 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ERVFC1P60507 584 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 LRRC18Q8N456 261 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 NRXN1Q9ULB1 1477 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 NME2P22392 152 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 SSTR2P30874 369 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms