RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZNF558Q96NG5 402 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC25A18Q9H1K4 315 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 MED20Q9H944 212 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 WSB2Q9NYS7 404 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 CACNG4Q9UBN1 327 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 CHD3Q12873 2000 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 TRAPPC13A5PLN9 417 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 OR52A4PA6NMU1 304 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 G3V3G9 751 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 PEX12O00623 359 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 F13BP05160 661 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 MDKP21741 143 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 MMP11P24347 488 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 ATPAF1Q5TC12 328 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 FAM46CQ5VWP2 391 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 NKAIN2Q5VXU1 208 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 NOXRED1Q6NXP6 359 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 PRSS55Q6UWB4 352 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 VITQ6UXI7 678 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 TRAM1L1Q8N609 369 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM99Q8N816 258 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 AMER3Q8N944 861 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 OR1N1Q8NGS0 311 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 OR9A1PQ8NGU1 263 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 CD300LFQ8TDQ1 290 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 MR1Q95460 341 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 SMARCD1Q96GM5 515 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 CDKN2AIPNLQ96HQ2 116 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 KIRREL1Q96J84 757 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 TAAR9Q96RI9 348 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 SYNPO2LQ9H987 977 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 FGF20Q9NP95 211 aaPredicted RBP8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 SPHK2Q9NRA0 654 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 MED17Q9NVC6 651 aa8.88□□□□□ -0.99
PTCHD4-201ENST00000339488 TRBC1P01850 177 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 IL5P05113 134 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CKBP12277 381 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 GDI1P31150 447 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CEACAM6P40199 344 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 HSD11B2P80365 405 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SHC2P98077 582 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 TNFAIP1Q13829 316 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CBFBQ13951 182 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC36A4Q6YBV0 504 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CLDN19Q8N6F1 224 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 POGLUT1Q8NBL1 392 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR4C16Q8NGL9 310 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR2L8Q8NGY9 312 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 BRIX1Q8TDN6 353 aaKnown RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 NUDCD2Q8WVJ2 157 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CMTM7Q96FZ5 175 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 IMP4Q96G21 291 aaKnown RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF587Q96SQ5 575 aaPredicted RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF649Q9BS31 505 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 RGCCQ9H4X1 137 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 MIEF1Q9NQG6 463 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 NUDT4Q9NZJ9 180 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF346Q9UL40 294 aaKnown RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SBF1O95248 1867 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 A0A087WZY1 265 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 MED19A0JLT2 244 aaPredicted RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 PRAMEF26H0Y7S4 382 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 M0R143 59 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 TGOLN2O43493 480 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR1F1O43749 312 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 HYAL3O43820 417 aaPredicted RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CD74P04233 296 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR4A8P0C604 315 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR8U9P0C7N5 309 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 LINC00614P0C842 121 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 PKMP14618 531 aaKnown RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 EPB42P16452 691 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SOAT1P35610 550 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 MNDAP41218 407 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 NFATC4Q14934 902 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 PCBP2Q15366 365 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■■■□□ 17.4
PTCHD4-201ENST00000339488 PNLIPRP3Q17RR3 467 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 DACT2Q5SW24 774 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 PTRHD1Q6GMV3 140 aaKnown RBP8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR52N2Q8NGI0 321 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 OR8U1Q8NH10 309 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 RSC1A1Q92681 617 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 MRGPRX4Q96LA9 322 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 ZDHHC5Q9C0B5 715 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 UBQLN3Q9H347 655 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 EXO5Q9H790 373 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 TRPV4Q9HBA0 871 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SLC2A4RGQ9NR83 387 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 ASB6Q9NWX5 421 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 CNIH4Q9P003 139 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 NDOR1Q9UHB4 597 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 A4GNTQ9UNA3 340 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 HS3ST3B1Q9Y662 390 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 A0A087WV62 115 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 C1orf226A1L170 272 aa8.87□□□□□ -0.99
PTCHD4-201ENST00000339488 SMCO3A2RU48 225 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms