RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GFERP55789 205 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ACSM1Q08AH1 577 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 SNTB2Q13425 540 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MELKQ14680 651 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 FHL5Q5TD97 284 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PRAMEF8Q5VWM4 474 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PRAMEF7Q5VXH5 474 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 GJD3Q8N144 294 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 OR11G2Q8NGC1 345 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 RFKQ969G6 155 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 SEC22CQ9BRL7 303 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 LRRC61Q9BV99 259 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF416Q9BWM5 594 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 C20orf85Q9H1P6 137 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 RPS6KB2Q9UBS0 482 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ING1Q9UK53 422 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ANXA2P2A6NMY6 339 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 AGR2O95994 175 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 IGKV1D-16P01601 117 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 IGHA1P01876 353 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 SNRPBP14678 240 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 VEGFCP49767 419 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 UBE2IP63279 158 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PLAURQ03405 335 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 DEFB133Q30KQ1 61 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 EIPR1Q53HC9 387 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ARL14Q8N4G2 192 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 TNFRSF13CQ96RJ3 184 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 OR10A4Q9H209 315 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 CCDC86Q9H6F5 360 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MEPEQ9NQ76 525 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF175Q9Y473 711 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 HEATR5AQ86XA9 2040 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PCDH15Q96QU1 1955 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 PDCD5O14737 125 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 ATP1B1P05026 303 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 HOXC4P09017 264 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 ARL9Q6T311 187 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 KLHL1Q9NR64 748 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 GMEB2Q9UKD1 530 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM74A7A6NL05 159 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 L7N2F9 121 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 SLC3A1Q07837 685 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 MGAT2Q10469 447 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM74A3Q4VXF1 159 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 KIAA0895LQ68EN5 471 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM198BQ6UWH4 519 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 CDK20Q8IZL9 346 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 OR13C5Q8NGS8 318 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 OR52N1Q8NH53 320 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 OR56B4Q8NH76 319 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 USB1Q9BQ65 265 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 PCDHB16Q9NRJ7 776 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 ERVK-19Q9WJR5 959 aa14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 EXOGQ9Y2C4 368 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-201ENST00000319854 A0A1B0GWA3 101 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 CHURC1-FNTBB4DL54 471 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 KRBOX1C9JBD0 128 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 APOC3P02656 99 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 FGF2P09038 288 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ACVR1BP36896 505 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 CBX5P45973 191 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 PSG6Q00889 435 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 KLF9Q13886 244 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 BVESQ8NE79 360 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 FN3KQ9H479 309 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 TMEM27Q9HBJ8 222 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 LYRM4Q9HD34 91 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 WSB2Q9NYS7 404 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 FLRT3Q9NZU0 649 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 LRIT1Q9P2V4 623 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 MED31Q9Y3C7 131 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 SESN1Q9Y6P5 492 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 TUBAL3A6NHL2 446 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 IMPA2O14732 288 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 PEPDP12955 493 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 RAD52P43351 418 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ARFIP1P53367 373 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 CRMP1Q14194 572 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ALG10BQ5I7T1 473 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 OR5M10Q6IEU7 315 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 POMZP3Q6PJE2 187 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 NHLRC1Q6VVB1 395 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 CEACAM19Q7Z692 300 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 C19orf47Q8N9M1 422 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 OR4K13Q8NH42 304 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ASB12Q8WXK4 309 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ATOH1Q92858 354 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 SLC38A3Q99624 504 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF304Q9HCX3 659 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ATPIF1Q9UII2 106 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 DAPL1A0PJW8 107 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 SHISA7A6NL88 538 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM171A2A8MVW0 826 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 MCRIP1C9JLW8 97 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 PEX14O75381 377 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ADRB1P08588 477 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms