RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 PRPS1P60891 318 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ZNF117Q03924 483 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ZNF684Q5T5D7 378 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ZNF57Q68EA5 555 aaPredicted RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 LSM14AQ8ND56 463 aaKnown RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 LIPHQ8WWY8 451 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 HSD17B8Q92506 261 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 RGP1Q92546 391 aaPredicted RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 LCORQ96JN0 433 aaPredicted RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 LPAR4Q99677 370 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 EXOSC3Q9NQT5 275 aaKnown RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ANKRD10Q9NXR5 420 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 MMACHCQ9Y4U1 282 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ALPK2Q86TB3 2170 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 TRAV1-2A0A0B4J238 106 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 TRBV2A0A0J9YWF9 115 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 FAM240BA0A1B0GVZ2 78 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 H7C1C5 153 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 UCHL1P09936 223 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 FOLR1P15328 257 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 EDNRAP25101 427 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 RBMS1P29558 406 aaKnown RBP18.76■□□□□ 0.59
TTC39C-202ENST00000317571 LCN6P62502 163 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ZP2Q05996 745 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 GPR176Q14439 515 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 SLC35D3Q5M8T2 416 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ESPNLQ6ZVH7 1005 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ASB18Q6ZVZ8 466 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 PRSS58Q8IYP2 241 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 C10orf53Q8N6V4 93 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 CADM4Q8NFZ8 388 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 GFI1Q99684 422 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 ALG12Q9BV10 488 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 NANSQ9NR45 359 aa18.76■□□□□ 0.59
TTC39C-202ENST00000317571 GLCEO94923 617 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 HLA-DMAP28067 261 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 TACR3P29371 465 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 BTCP35070 178 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 RORAP35398 523 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 RPL22L1Q6P5R6 122 aaKnown RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 ZNF527Q8NB42 609 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 RPS4Y2Q8TD47 263 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 THAP7Q9BT49 309 aaPredicted RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 ZCCHC4Q9H5U6 513 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 UBE2ZQ9H832 354 aaPredicted RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 FZD7O75084 574 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 CD14P08571 375 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 PNMTP11086 282 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 EPXP11678 715 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 POU3F3P20264 500 aaPredicted RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 GRK6P43250 576 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 CAPZA2P47755 286 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 PITPNBP48739 271 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 CTXN1P60606 82 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 LGALS3BPQ08380 585 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 EBPQ15125 230 aaKnown RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 CCDC85BQ15834 202 aaPredicted RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 ALG10Q5BKT4 473 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 MZT2BQ6NZ67 158 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 OR1F2PQ96R84 312 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 MARVELD1Q9BSK0 173 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 HDHD2Q9H0R4 259 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 AK6Q9Y3D8 172 aaKnown RBP18.75■□□□□ 0.59
TTC39C-202ENST00000317571 ADAMTS20P59510 1910 aa18.75■□□□□ 0.59
TTC39C-202ENST00000317571 TCRBV16S1A1N1A0A5B0 115 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 EEF1E1O43324 174 aaKnown RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 SRP9P49458 86 aaKnown RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 EPHA4P54764 986 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 RPL18Q07020 188 aaKnown RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 C1QL3Q5VWW1 255 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 SLITRK4Q8IW52 837 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 TAAR8Q969N4 342 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 ELF4Q99607 663 aaPredicted RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 SYNDIG1Q9H7V2 258 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 NPFFR2Q9Y5X5 522 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 ARID1BQ8NFD5 2236 aaPredicted RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 CENPBD1B2RD01 187 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 TNRC18O15417 2968 aaPredicted RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 IGF2P01344 180 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 GIMD1P0DJR0 217 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 HSD11B2P80365 405 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 MESTQ5EB52 335 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 THOC7Q6I9Y2 204 aaKnown RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 UNQ9370/PRO34162Q6UXP9 181 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 SLC35F3Q8IY50 421 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 RFT1Q96AA3 541 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 TSPAN32Q96QS1 320 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 CCNL2Q96S94 520 aaPredicted RBP18.74■□□□□ 0.59
TTC39C-202ENST00000317571 NDEL1Q9GZM8 345 aa18.74■□□□□ 0.59
TTC39C-202ENST00000317571 OR6C70A6NIJ9 312 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 NOTOA8MTQ0 251 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 IL10RAQ13651 578 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 YIF1BQ5BJH7 314 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 C1orf189Q5VU69 101 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 MARCH3Q86UD3 253 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 SLC25A45Q8N413 288 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 YIPF7Q8N8F6 280 aa18.73■□□□□ 0.59
TTC39C-202ENST00000317571 ADAM19Q9H013 955 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms