RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 HMBOX1Q6NT76 420 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 PGM2L1Q6PCE3 622 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 PODNL1Q6PEZ8 512 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 CLEC2AQ6UVW9 174 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 GPAT4Q86UL3 456 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 VRK2Q86Y07 508 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 CADM2Q8N3J6 435 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 POMGNT2Q8NAT1 580 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 OR9K2Q8NGE7 335 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 SLC38A5Q8WUX1 472 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 AURKBQ96GD4 344 aaPredicted RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 BOD1Q96IK1 185 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 ITCHQ96J02 903 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 TNFRSF13CQ96RJ3 184 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 TAPBPLQ9BX59 468 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 RMND5AQ9H871 391 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 TPT1P8Q9HAU6 139 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 TMEM45AQ9NWC5 275 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 THUMPD1Q9NXG2 353 aaKnown RBP7.13□□□□□ -1.27
TPM3-203ENST00000312970 P2RX2Q9UBL9 471 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 RAB21Q9UL25 225 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 ABCA1O95477 2261 aa7.13□□□□□ -1.27
TPM3-203ENST00000312970 DSPPQ9NZW4 1301 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 A0A096LPI6 279 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 TMEM120BA0PK00 339 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 TMEM247A6NEH6 219 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 OR6C65A6NJZ3 312 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ELOA3DA6NLF2 546 aaPredicted RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 RNF212BA8MTL3 300 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 H7C417 338 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 J3QW42 95 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 UBDO15205 165 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 GPRIN2O60269 458 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 BCHEP06276 602 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ETFAP13804 333 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 SLC25A16P16260 332 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 CDH2P19022 906 aaPredicted RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 NCF2P19878 526 aaPredicted RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 POLR2JP52435 117 aaKnown RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 EFNA4P52798 201 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 SLC18A1P54219 525 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 DSTNP60981 165 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 BNIP2Q12982 314 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ELOA3BQ3SY89 546 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 SLC9B1Q4ZJI4 515 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 C1orf140Q5VVS0 124 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 KLHL24Q6TFL4 600 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 B3GLCTQ6Y288 498 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 CREB3L2Q70SY1 520 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 FKBP9P1Q75LS8 142 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 CLIP4Q8N3C7 705 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ELOA3Q8NG57 546 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 FAM168AQ92567 244 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 MAELQ96JY0 434 aaKnown RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 ZNF385AQ96PM9 386 aaKnown RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 MANSC1Q9H8J5 431 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 CACYBPQ9HB71 228 aaKnown RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 OBP2BQ9NPH6 170 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 SLC6A13Q9NSD5 602 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ADPRHL2Q9NX46 363 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 ZNF443Q9Y2A4 671 aaPredicted RBP7.12□□□□□ -1.27
TPM3-203ENST00000312970 IFT52Q9Y366 437 aa7.12□□□□□ -1.27
TPM3-203ENST00000312970 TGP01266 2768 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 KLF11O14901 512 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 PRG2P13727 222 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 P2RY4P51582 365 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 SLC25A3Q00325 362 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 RGNQ15493 299 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 TMEM249Q2WGJ8 235 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 CHRFAM7AQ494W8 412 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 HIKESHIQ53FT3 197 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 CYB5R2Q6BCY4 276 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 LRFN4Q6PJG9 635 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 ZNF525Q8N782 197 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 MFSD8Q8NHS3 518 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 MGARPQ8TDB4 240 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 HTRA1Q92743 480 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 PROX1Q92786 737 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 TMEM19Q96HH6 336 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 KCNS3Q9BQ31 491 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 SDR39U1Q9NRG7 319 aaPredicted RBP7.11□□□□□ -1.27
TPM3-203ENST00000312970 NKIRAS1Q9NYS0 192 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 MOKQ9UQ07 419 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 RASD1Q9Y272 281 aa7.11□□□□□ -1.27
TPM3-203ENST00000312970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.278e-7■■■■□ 20.9
TPM3-203ENST00000312970 PLCE1Q9P212 2302 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 A0A096LNT2 108 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 ZNF587BE7ETH6 402 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 ATP6V1G2-DDX39BF2Z307 99 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 CLIC1O00299 241 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 NPIPB7O75200 414 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 AHSA1O95433 338 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 LGI1O95970 557 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 CRYAAP02489 173 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 CSF3P09919 207 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms