RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 RNFT2Q96EX2 444 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 CRELD1Q96HD1 420 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 JSRP1Q96MG2 331 aaPredicted RBP12.72□□□□□ -0.37
SS18-201ENST00000269137 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 DEPPQ9NTK1 212 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 DKKL1Q9UK85 242 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 DIMT1Q9UNQ2 313 aaKnown RBP12.72□□□□□ -0.37
SS18-201ENST00000269137 POLHQ9Y253 713 aa12.72□□□□□ -0.37
SS18-201ENST00000269137 CCDC160A6NGH7 325 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 H3BSA7 217 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 M0R082 166 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ADRA2AP08913 450 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 PRKAR1AP10644 381 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 TFPIP10646 304 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 IMPDH2P12268 514 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 SDHAP31040 664 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.38
SS18-201ENST00000269137 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.38
SS18-201ENST00000269137 FOXO1Q12778 655 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ZP4Q12836 540 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 LSAMPQ13449 338 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 CCDC81Q6ZN84 652 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 LINC00696Q6ZRV3 163 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 NPEPL1Q8NDH3 523 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 OR5M1Q8NGP8 315 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.38
SS18-201ENST00000269137 FAM173AQ9BQD7 235 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 HCAR1Q9BXC0 346 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ZFP64Q9NPA5 681 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 KLHL1Q9NR64 748 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 ALKBH4Q9NXW9 302 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 PTTG2Q9NZH5 202 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 WARS2Q9UGM6 360 aaKnown RBP12.71□□□□□ -0.38
SS18-201ENST00000269137 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.38
SS18-201ENST00000269137 HDGFL3Q9Y3E1 203 aa12.71□□□□□ -0.38
SS18-201ENST00000269137 MED12Q93074 2177 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 SLC22A31A6NKX4 558 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 H3BML4 177 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 RAB36O95755 333 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 F10P00742 488 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 F13BP05160 661 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 FREM3P0C091 2139 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 ADORA3P0DMS8 318 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 SLC2A5P22732 501 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
SS18-201ENST00000269137 MYBPHQ13203 477 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 MFAP5Q13361 173 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 H1FNTQ75WM6 255 aaPredicted RBP12.7□□□□□ -0.38
SS18-201ENST00000269137 FAM98AQ8NCA5 519 aaKnown RBP12.7□□□□□ -0.38
SS18-201ENST00000269137 OTULINQ96BN8 352 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 Q96M85 177 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 UBL7Q96S82 380 aaPredicted RBP12.7□□□□□ -0.38
SS18-201ENST00000269137 MED20Q9H944 212 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 HAO2Q9NYQ3 351 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 GRHPRQ9UBQ7 328 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 KLK13Q9UKR3 277 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 EXOGQ9Y2C4 368 aaKnown RBP12.7□□□□□ -0.38
SS18-201ENST00000269137 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
SS18-201ENST00000269137 TEX13CA0A0J9YWL9 993 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR5H15A6NDH6 313 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR6A2O95222 327 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 TCEA1P23193 301 aaKnown RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 CDC20Q12834 499 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR7A5Q15622 319 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 CYB561A3Q8NBI2 242 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 MDS2Q8NDY4 140 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR2M7Q8NG81 312 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 RASD2Q96D21 266 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 TEAD3Q99594 435 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 NMNAT2Q9BZQ4 307 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 ZNF552Q9H707 407 aaPredicted RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 CHST11Q9NPF2 352 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 FANCFQ9NPI8 374 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 PLA2G3Q9NZ20 509 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 TRAPPC4Q9Y296 219 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 B3GALT5Q9Y2C3 310 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 RPH3AQ9Y2J0 694 aaPredicted RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 CCDC182A6NF36 153 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 A6NL46 340 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 ZNF701M0R085 212 aaPredicted RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 RNF13O43567 381 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 IGHMP01871 453 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 GTF2E2P29084 291 aaKnown RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 B3GALT5-AS1P59052 145 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 GPR85P60893 370 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 PUDPQ08623 228 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms