RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 RBFOX1Q9NWB1 397 aaKnown RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 KLK4Q9Y5K2 254 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 NUDT21O43809 227 aaKnown RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 OR52W1Q6IF63 320 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 CMSS1Q9BQ75 279 aaKnown RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ELK1P19419 428 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 HSD11B1LQ7Z5J1 315 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 DOCK7Q96N67 2140 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 OR51B6Q9H340 312 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 TRIM23P36406 574 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 GAB1Q13480 694 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 C4orf17Q53FE4 359 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 SLC38A5Q8WUX1 472 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF480Q8WV37 535 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 FAM3CQ92520 227 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ATOH8Q96SQ7 321 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ARPC5LQ9BPX5 153 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 SEC14L6B5MCN3 397 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 GALR3O60755 368 aaPredicted RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 GPR75O95800 540 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 LIPIQ6XZB0 460 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 LAX1Q8IWV1 398 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 PLPP5Q8NEB5 264 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 KLF16Q9BXK1 252 aaPredicted RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 BCL7AQ4VC05 210 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 VN1R3Q9BXE9 311 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 OLAHQ9NV23 265 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 PCDHGA1Q9Y5H4 931 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 H0YIV9 168 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 CER1O95813 267 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 VRK2Q86Y07 508 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 OR6V1Q8N148 313 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 HSFX1Q9UBD0 423 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 RCE1Q9Y256 329 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 HENMT1Q5T8I9 393 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 MBOAT2Q6ZWT7 520 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 MCATQ8IVS2 390 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 C12orf76Q8N812 135 aaPredicted RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 POU3F1Q03052 451 aaPredicted RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 EXOSC7Q15024 291 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 NKAIN3Q8N8D7 197 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 UBL3O95164 117 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 GASTP01350 101 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SSTR2P30874 369 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 LRRC18Q8N456 261 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 PIGCQ92535 297 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 NAT6Q93015 286 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 HHIPL1Q96JK4 782 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SORBS1Q9BX66 1292 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SMIM3Q9BZL3 60 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 WDR76Q9H967 626 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 OR5H15A6NDH6 313 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 OR5H14A6NHG9 310 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 OR5H1A6NKK0 313 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 GABARAPH6UMI1 98 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 GABARAPO95166 117 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 VASPP50552 380 aaPredicted RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 TNFRSF17Q02223 184 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM40Q8WWA1 233 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SPTBN1Q01082 2364 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ARAFP10398 606 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SEC61A1P61619 476 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ENTHD1Q8IYW4 607 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 C15orf54Q8N8G6 183 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM174Q8WUU8 243 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 GGHQ92820 318 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 STARD5Q9NSY2 213 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 CACNA1IQ9P0X4 2223 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SUSD5O60279 629 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 MTCP1P56278 107 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF91Q05481 1191 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 EID2Q8N6I1 236 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 PTRH2Q9Y3E5 179 aaKnown RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 PLXNB2O15031 1838 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 K7EQM0 130 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ARHGAP33O14559 1287 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 ZIC2O95409 532 aaPredicted RBP16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 IL2RGP31785 369 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 SSX9Q7RTT3 188 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 KATNB1Q9BVA0 655 aa16.25■□□□□ 0.19
NOTCH3-201ENST00000263388 TIMP2P16035 220 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 AVPI1Q5T686 147 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 BADQ92934 168 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 ILKQ13418 452 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 OBP2BQ9NPH6 170 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 MCRIP1C9JLW8 97 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF133P52736 654 aaPredicted RBP16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 STK11Q15831 433 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM200AQ86VY9 491 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 PSD2Q9BQI7 771 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 TNFRSF4P43489 277 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 FBXO24O75426 580 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 NCR1O76036 304 aa16.24■□□□□ 0.19
NOTCH3-201ENST00000263388 HTR1FP30939 366 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms