RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 JMJD7P0C870 316 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L2P0CJ85 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L3P0CJ86 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L4P0CJ87 422 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L5P0CJ88 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L6P0CJ89 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4L7P0CJ90 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 CSRP1P21291 193 aaKnown RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 MGAT2Q10469 447 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 SERTAD2Q14140 314 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 FAM74A3Q4VXF1 159 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TRMT12Q53H54 448 aaKnown RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TNFAIP8L2Q6P589 184 aaPredicted RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 LAPTM4BQ86VI4 370 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 CTHRC1Q96CG8 243 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 LRFN5Q96NI6 719 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DGAT2Q96PD7 388 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TINAGL1Q9GZM7 467 aaPredicted RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 ABCG5Q9H222 651 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 SLC25A19Q9HC21 320 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 SDHAF3Q9NRP4 125 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 NUDT15Q9NV35 164 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 DUX4Q9UBX2 424 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 PISDQ9UG56 409 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 ING1Q9UK53 422 aaPredicted RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 IGKV3D-11A0A0A0MRZ8 115 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 A0A1W2PNU3 283 aaPredicted RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TRABD2BA6NFA1 517 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 S100A8P05109 93 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 CPEP16870 476 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZNF3P17036 446 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 EIF3IQ13347 325 aaKnown RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 LASP1Q14847 261 aaKnown RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 FHL5Q5TD97 284 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 B3GNTL1Q67FW5 361 aaPredicted RBP17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 LCN10Q6JVE6 187 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 TSLPQ969D9 159 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 MAL2Q969L2 176 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 FN3KQ9H479 309 aa17.32■□□□□ 0.36
COL4A3BP-201ENST00000261415 NINQ8N4C6 2090 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 A0A087WV62 115 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 IFI6P09912 130 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZGLP1P0C6A0 271 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 KCNJ5P48544 419 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 BIKQ13323 160 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 HFEQ30201 348 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 GCNT6Q5T4J0 391 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 OVCH1Q7RTY7 1134 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 NANPQ8TBE9 248 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 MS4A4EQ96PG1 132 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TAAR9Q96RI9 348 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TREX2Q9BQ50 279 aaPredicted RBP17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 VN1R1Q9GZP7 353 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 AKIRIN1Q9H9L7 192 aaPredicted RBP17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 C14orf105Q9NVL8 296 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 WRBO00258 174 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TM4SF5O14894 197 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 RECKO95980 971 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 S100PP25815 95 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 FOXL2P58012 376 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TSPAN5P62079 268 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 DHODHQ02127 395 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 MAP4K2Q12851 820 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZNF124Q15973 351 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 NTRK2Q16620 822 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 SHISA6Q6ZSJ9 500 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 PDZD9Q8IXQ8 264 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR52P1PQ8NH57 321 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 RBM14Q96PK6 669 aaKnown RBP17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZPBPQ9BS86 351 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 DDA1Q9BW61 102 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR51I1Q9H343 314 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TMEM38AQ9H6F2 299 aa17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 C19orf53Q9UNZ5 99 aaPredicted RBP17.31■□□□□ 0.36
COL4A3BP-201ENST00000261415 TCRBV16S1A1N1A0A5B0 115 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 NDUFS6O75380 124 aaKnown RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 KLK3P07288 261 aaPredicted RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 PTGES3Q15185 160 aaKnown RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZNF454Q8N9F8 522 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 C11orf65Q8NCR3 313 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR5D16Q8NGK9 328 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 COQ8AQ8NI60 647 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 SFT2D1Q8WV19 159 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 RFT1Q96AA3 541 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 MRPS24Q96EL2 167 aaKnown RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 C16orf58Q96GQ5 468 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 CLEC2DQ9UHP7 191 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 PTPRZ1P23471 2315 aaPredicted RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 HMGN4O00479 90 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 NME6O75414 186 aaPredicted RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 RAB3BP20337 219 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 DEFA5Q01523 94 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 VEZF1Q14119 521 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 EXOSC7Q15024 291 aaKnown RBP17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 MICBQ29980 383 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 STX12Q86Y82 276 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 TM9SF4Q92544 642 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 RAB8BQ92930 207 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms