RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CGB2Q6NT52 195 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 TTC33Q6PID6 262 aaPredicted RBP10.9□□□□□ -0.66
CBWD3-208ENST00000612050 C10orf111Q8N326 155 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 C17orf78Q8N4C9 275 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 C1orf162Q8NEQ5 155 aaPredicted RBP10.9□□□□□ -0.66
CBWD3-208ENST00000612050 OR2T12Q8NG77 320 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 VANGL1Q8TAA9 524 aaPredicted RBP10.9□□□□□ -0.66
CBWD3-208ENST00000612050 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 C10orf82Q8WW14 230 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 CMTM5Q96DZ9 223 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 RADILQ96JH8 1075 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 FAM107BQ9H098 131 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 LIME1Q9H400 295 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 CXorf56Q9H5V9 222 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 AMDHD2Q9Y303 409 aa10.9□□□□□ -0.66
CBWD3-208ENST00000612050 A0A087WUJ7 227 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 OR5H1A6NKK0 313 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 M0R3H8 397 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 GSTA4O15217 222 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 CHP2O43745 196 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 TMCC2O75069 709 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 GMNNO75496 209 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 THBDP07204 575 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 MPGP29372 298 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 GLIPR1L2Q4G1C9 344 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 RABL3Q5HYI8 236 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 HMBOX1Q6NT76 420 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 NIPAL3Q6P499 406 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 TMEM108Q6UXF1 575 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 H1FNTQ75WM6 255 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 CCDC80Q76M96 950 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 OR6S1Q8NH40 331 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 MPP4Q96JB8 637 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 OXGR1Q96P68 337 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 ZNF317Q96PQ6 595 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 PIP5K1AQ99755 562 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 ARHGDIGQ99819 225 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 HOPXQ9BPY8 73 aaPredicted RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 ELAC2Q9BQ52 826 aaKnown RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 TMEM43Q9BTV4 400 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 MOV10Q9HCE1 1003 aaKnown RBP10.89□□□□□ -0.67
CBWD3-208ENST00000612050 B3GAT2Q9NPZ5 323 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 ARMCX1Q9P291 453 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 MGAT4BQ9UQ53 548 aa10.89□□□□□ -0.67
CBWD3-208ENST00000612050 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 A0A0B4J2E0 115 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 A0A1B0GX12 115 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 ELOVL7A1L3X0 281 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 TRAPPC13A5PLN9 417 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 CPSF4LA6NMK7 179 aaKnown RBP10.88□□□□□ -0.67
CBWD3-208ENST00000612050 FAM220BPB1ANY3 271 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 KLF4O43474 513 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 RAMP1O60894 148 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 NPIPB7O75200 414 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 SLC43A1O75387 559 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 MT-ATP6P00846 226 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 COX4I1P13073 169 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 HTR2AP28223 471 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 CDH12P55289 794 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 TAS2R41P59536 307 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 PRPS1P60891 318 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 PMS2P3Q13401 168 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 NRF1Q16656 503 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 DUSP7Q16829 419 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 LRRC23Q53EV4 343 aaPredicted RBP10.88□□□□□ -0.67
CBWD3-208ENST00000612050 ENTPD8Q5MY95 495 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 SHEQ5VZ18 495 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 CREB3L2Q70SY1 520 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 SCAIQ8N9R8 606 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 ADPRHL1Q8NDY3 354 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 OR52N5Q8NH56 324 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 FBXW5Q969U6 566 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 RCN3Q96D15 328 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 KTI12Q96EK9 354 aaPredicted RBP10.88□□□□□ -0.67
CBWD3-208ENST00000612050 KCNS3Q9BQ31 491 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 POLR2J2Q9GZM3 115 aaKnown RBP10.88□□□□□ -0.67
CBWD3-208ENST00000612050 POLR2J3Q9H1A7 115 aaKnown RBP10.88□□□□□ -0.67
CBWD3-208ENST00000612050 CXXC4Q9H2H0 198 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 ALG2Q9H553 416 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 RCE1Q9Y256 329 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 SH3GLB1Q9Y371 365 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 FBN2P35556 2912 aa10.88□□□□□ -0.67
CBWD3-208ENST00000612050 GMNCA6NCL1 334 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 M0R082 166 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 HS3ST1O14792 307 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 CDH2P19022 906 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-208ENST00000612050 CD53P19397 219 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 PTAFRP25105 342 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 GRPRP30550 384 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
CBWD3-208ENST00000612050 CLDN17P56750 224 aa10.87□□□□□ -0.67
CBWD3-208ENST00000612050 UBE2NP61088 152 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms