RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 OR7A5Q15622 319 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 IGFN1Q86VF2 1251 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 OR14L1PQ8NHC6 308 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 MYDGFQ969H8 173 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 NRIP3Q9NQ35 241 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 MRPL39Q9NYK5 338 aaKnown RBP16.23■□□□□ 0.19
VRK3-225ENST00000601912 H2AFY2Q9P0M6 372 aaPredicted RBP16.23■□□□□ 0.19
VRK3-225ENST00000601912 IER3IP1Q9Y5U9 82 aa16.23■□□□□ 0.19
VRK3-225ENST00000601912 OR2M5A3KFT3 312 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 PINLYPA6NC86 204 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 EFCAB10A6NFE3 127 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 FTCDNL1E5RQL4 147 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 ARPC3O15145 178 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 TRAPPC6AO75865 159 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 CD14P08571 375 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 ZNF3P17036 446 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 RPL5P46777 297 aaKnown RBP16.22■□□□□ 0.19
VRK3-225ENST00000601912 NR1H2P55055 460 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 AHSA2Q719I0 299 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 SCAIQ8N9R8 606 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 ANKK1Q8NFD2 765 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 RFKQ969G6 155 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 RELTQ969Z4 430 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 ZNF582Q96NG8 517 aaPredicted RBP16.22■□□□□ 0.19
VRK3-225ENST00000601912 COPS4Q9BT78 406 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 KATNB1Q9BVA0 655 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 HES7Q9BYE0 225 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 CCDC90BQ9GZT6 254 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 TMEM185BQ9H7F4 350 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 VCX3AQ9NNX9 186 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 PAK1IP1Q9NWT1 392 aaPredicted RBP16.22■□□□□ 0.19
VRK3-225ENST00000601912 KLHL21Q9UJP4 597 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 HDGFL3Q9Y3E1 203 aa16.22■□□□□ 0.19
VRK3-225ENST00000601912 LIPT2A6NK58 231 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 TRIM64CA6NLI5 447 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 GJE1A6NN92 205 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 PRODHO43272 600 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 RGS10O43665 173 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 SLC2A10O95528 541 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 RFPL3SP0C7P2 107 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 ADORA3P0DMS8 318 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 APEHP13798 732 aaKnown RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 PAICSP22234 425 aaKnown RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 CTXN1P60606 82 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 MYBPHQ13203 477 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 TMEM176BQ3YBM2 270 aaPredicted RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 CCDC81Q6ZN84 652 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 GALNTL5Q7Z4T8 443 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 BCDIN3DQ7Z5W3 292 aaKnown RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 LRRC75AQ8NAA5 344 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 TMEM178AQ8NBL3 297 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 GGHQ92820 318 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 OR5B2Q96R09 309 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 UBL7Q96S82 380 aaPredicted RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 ALKBH4Q9NXW9 302 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 TAS2R5Q9NYW4 299 aa16.21■□□□□ 0.19
VRK3-225ENST00000601912 CNOT2Q9NZN8 540 aaKnown RBP16.21■□□□□ 0.19
VRK3-225ENST00000601912 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.21■□□□□ 0.19
VRK3-225ENST00000601912 KDM4EB2RXH2 506 aaPredicted RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 M0R082 166 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 CEACAM4O75871 244 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 AHCYP23526 432 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 SFTPDP35247 375 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 ERVK-25P63136 954 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 PLGLB1Q02325 96 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 ZNF766Q5HY98 468 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 NXNL2Q5VZ03 156 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 IGFL2Q6UWQ7 119 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 H1FNTQ75WM6 255 aaPredicted RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 CXXC5Q7LFL8 322 aaKnown RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 YRDCQ86U90 279 aaKnown RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 CPOQ8IVL8 374 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 FAM83FQ8NEG4 500 aaPredicted RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 ZNF417Q8TAU3 575 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 OTULINQ96BN8 352 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 ZNF587Q96SQ5 575 aaPredicted RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 OR2B2Q9GZK3 357 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 CCDC86Q9H6F5 360 aaKnown RBP16.21■□□□□ 0.18
VRK3-225ENST00000601912 ERVK-18Q9QC07 812 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 DKK4Q9UBT3 224 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 ADAM18Q9Y3Q7 739 aa16.21■□□□□ 0.18
VRK3-225ENST00000601912 PRR23D1E9PI22 279 aaPredicted RBP16.2■□□□□ 0.18
VRK3-225ENST00000601912 PLPP3O14495 311 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 IMPA2O14732 288 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 RNF13O43567 381 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 OPN1LWP04000 364 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 F13BP05160 661 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 TFAP2AP05549 437 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 PRR23D2P0DMB1 279 aaPredicted RBP16.2■□□□□ 0.18
VRK3-225ENST00000601912 IMPDH2P12268 514 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 ACVR2AP27037 513 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 TNFSF10P50591 281 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 RAC1P63000 192 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 PIGFQ07326 219 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 PLBD1Q6P4A8 553 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 PRSS48Q7RTY5 328 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 GID4Q8IVV7 300 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 STX19Q8N4C7 294 aa16.2■□□□□ 0.18
VRK3-225ENST00000601912 FAM98AQ8NCA5 519 aaKnown RBP16.2■□□□□ 0.18
VRK3-225ENST00000601912 OR52E2Q8NGJ4 325 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms