RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 HOXB1P14653 301 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 CXCR1P25024 350 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 ZCCHC23Q6ZST2 131 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 CREB3L2Q70SY1 520 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 LINGO2Q7L985 606 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 CMIPQ8IY22 773 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 C4orf33Q8N1A6 199 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 TUBGCP3Q96CW5 907 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 LRRC37BQ96QE4 947 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 USP22Q9UPT9 525 aa16.95■□□□□ 0.3
PRKCSH-216ENST00000592445 CFAP73A6NFT4 308 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 RNASET2O00584 256 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 CPSF4O95639 269 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 IGFBP1P08833 259 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 SAGP10523 405 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 CBR1P16152 277 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 UQCRC2P22695 453 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 GPR6P46095 362 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 SH3BGRP55822 239 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 CLDN8P56748 225 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 HILS1P60008 231 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 ROR2Q01974 943 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 NPRL3Q12980 569 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 SNTB2Q13425 540 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 DAG1Q14118 895 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 FAHD2BQ6P2I3 314 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 MYPOPQ86VE0 399 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 ANKRD46Q86W74 232 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 CLDND2Q8NHS1 167 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 FAHD2AQ96GK7 314 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 JMJD8Q96S16 334 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 NELFAQ9H3P2 528 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 CMAHPQ9Y471 501 aa16.94■□□□□ 0.3
PRKCSH-216ENST00000592445 IGHV2OR16-5A0A0B4J2B6 119 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 VAMP5O95183 116 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 FAM153BP0C7A2 387 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 ALDH3A1P30838 453 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 CHI3L1P36222 383 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 MAD2L1Q13257 205 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 GNA13Q14344 377 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 KRT80Q6KB66 452 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 USP43Q70EL4 1123 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 IFT20Q8IY31 132 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 OR51F2Q8NH61 342 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 CRLF2Q9HC73 371 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 REV1Q9UBZ9 1251 aa16.93■□□□□ 0.3
PRKCSH-216ENST00000592445 AGAP5A6NIR3 686 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 FAAHO00519 579 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 TFP02787 698 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 EPHA1P21709 976 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 ARR3P36575 388 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 CAPZA2P47755 286 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 LIMS1P48059 325 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 ARF1P84077 181 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 EPS8Q12929 822 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 GSTA3Q16772 222 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 PRAMEF8Q5VWM4 474 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 PRAMEF7Q5VXH5 474 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 SAXO2Q658L1 398 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 EPHX4Q8IUS5 362 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 TEX29Q8N6K0 151 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 IL17RDQ8NFM7 739 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 LINC00470Q9BZP3 86 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 NOX3Q9HBY0 568 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 TREM2Q9NZC2 230 aa16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-216ENST00000592445 PRAMEF27A3QJZ7 478 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 M0R233 179 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 SYNGR3O43761 229 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 SHBGP04278 402 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 CHRM4P08173 479 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 GAAP10253 952 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 IL7RP16871 459 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 TCN1P20061 433 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 P2RY4P51582 365 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 BNIP2Q12982 314 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 SYPL1Q16563 259 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 SLC9B1Q4ZJI4 515 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 ELFN2Q5R3F8 820 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 CARM1Q86X55 608 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 CADM2Q8N3J6 435 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 ANKFN1Q8N957 763 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 VPS37AQ8NEZ2 397 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 OR8J2Q8NGG1 315 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 NEURL3Q96EH8 262 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 MECRQ9BV79 373 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 TXLNGYQ9BZA5 131 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 DPY30Q9C005 99 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 MS4A5Q9H3V2 200 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 RASD1Q9Y272 281 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 TGP01266 2768 aa16.91■□□□□ 0.3
PRKCSH-216ENST00000592445 PRSS51A0A1B0GVH4 220 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 A8MVM7 634 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 TMEM229AB2RXF0 380 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 PNPP00491 289 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 ACHEP22303 614 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 COL8A2P25067 703 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 POU3F1Q03052 451 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 EMX2Q04743 252 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms