RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 APH1AQ96BI3 265 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 SLC41A3Q96GZ6 507 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 MPP4Q96JB8 637 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 EPYCQ99645 322 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 USB1Q9BQ65 265 aaKnown RBP14.38□□□□□ -0.11
ERBB2-222ENST00000584908 CLEC4MQ9H2X3 399 aaPredicted RBP14.38□□□□□ -0.11
ERBB2-222ENST00000584908 SPAG4Q9NPE6 437 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 TAGLN3Q9UI15 199 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 PRSS50Q9UI38 385 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 ADAM21Q9UKJ8 722 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 B3GALT5Q9Y2C3 310 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
ERBB2-222ENST00000584908 LOC102725191A0A1B0GVB3 256 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 CPSF4LA6NMK7 179 aaKnown RBP14.37□□□□□ -0.11
ERBB2-222ENST00000584908 DEFB108AA8MXU0 73 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 CXCR6O00574 342 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 CASKO14936 926 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 ADAP00813 363 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 BGLAPP02818 100 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 THBDP07204 575 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 FXNQ16595 210 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-222ENST00000584908 GKAP1Q5VSY0 366 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-222ENST00000584908 TMEM225Q6GV28 225 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 WDR88Q6ZMY6 472 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 POLDIP3Q9BY77 421 aaKnown RBP14.37□□□□□ -0.11
ERBB2-222ENST00000584908 SLC19A3Q9BZV2 496 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 ACTR6Q9GZN1 396 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 ARL8BQ9NVJ2 186 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 CORINQ9Y5Q5 1042 aa14.37□□□□□ -0.11
ERBB2-222ENST00000584908 MAP1AP78559 2803 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-222ENST00000584908 PDLIM1O00151 329 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 SIAH2O43255 324 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 LTBQ06643 244 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 KRT72Q14CN4 511 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 CREB3L2Q70SY1 520 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 CBLL1Q75N03 491 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 H1FNTQ75WM6 255 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-222ENST00000584908 CDC20BQ86Y33 519 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 SCAIQ8N9R8 606 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 LZICQ8WZA0 190 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-222ENST00000584908 SLC25A36Q96CQ1 311 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 ZNF385AQ96PM9 386 aaKnown RBP14.36□□□□□ -0.11
ERBB2-222ENST00000584908 KCTD14Q9BQ13 255 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-222ENST00000584908 PRSS27Q9BQR3 290 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 B3GAT1Q9P2W7 334 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 SLC7A7Q9UM01 511 aa14.36□□□□□ -0.11
ERBB2-222ENST00000584908 M0R082 166 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 OR5F1O95221 314 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 MT-ATP6P00846 226 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 IGF2P01344 180 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 THRBP10828 461 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 GGT1P19440 569 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 TNFRSF1BP20333 461 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 LOXP28300 417 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-222ENST00000584908 GTF2E2P29084 291 aaKnown RBP14.35□□□□□ -0.11
ERBB2-222ENST00000584908 GRPRP30550 384 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 ANKRD34AQ69YU3 496 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 CASP12Q6UXS9 341 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.35□□□□□ -0.11
ERBB2-222ENST00000584908 GPAT4Q86UL3 456 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 EPHX4Q8IUS5 362 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 PGAM4Q8N0Y7 254 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 ZNF433Q8N7K0 673 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-222ENST00000584908 ZNF417Q8TAU3 575 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 RNF217Q8TC41 542 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 S100PBPQ96BU1 408 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 OXGR1Q96P68 337 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 ZNF587Q96SQ5 575 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-222ENST00000584908 SEC14L4Q9UDX3 406 aa14.35□□□□□ -0.11
ERBB2-222ENST00000584908 GSTA4O15217 222 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 KLF4O43474 513 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 HSD17B1P14061 328 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 IL32P24001 234 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 RBM34P42696 430 aaKnown RBP14.34□□□□□ -0.11
ERBB2-222ENST00000584908 OR1E2P47887 323 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 MNAT1P51948 309 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 BHLHA15Q7RTS1 189 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-222ENST00000584908 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 HSD17B8Q92506 261 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 TPD52L3Q96J77 140 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 MOGAT1Q96PD6 335 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 AMBRA1Q9C0C7 1298 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 PLEKHF2Q9H8W4 249 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 SLC7A10Q9NS82 523 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 ASB6Q9NWX5 421 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 NDE1Q9NXR1 346 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 MRPL39Q9NYK5 338 aaKnown RBP14.34□□□□□ -0.11
ERBB2-222ENST00000584908 CD300AQ9UGN4 299 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 RCE1Q9Y256 329 aa14.34□□□□□ -0.11
ERBB2-222ENST00000584908 RAI1Q7Z5J4 1906 aaPredicted RBP14.33□□□□□ -0.11
ERBB2-222ENST00000584908 ALPK2Q86TB3 2170 aa14.33□□□□□ -0.11
ERBB2-222ENST00000584908 AKAP9Q99996 3911 aa14.33□□□□□ -0.12
ERBB2-222ENST00000584908 CELSR1Q9NYQ6 3014 aa14.33□□□□□ -0.12
ERBB2-222ENST00000584908 A0A1W2PPR1 153 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms