RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	PNMT	P11086	282 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	HOXB4	P17483	251 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	GPX2	P18283	190 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	CBL	P22681	906 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	PTAFR	P25105	342 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	CD40	P25942	277 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	MPG	P29372	298 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	SELENOP	P49908	381 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	P2RY4	P51582	365 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	IL1RL1	Q01638	556 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	EGR4	Q05215	589 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	LGALS3BP	Q08380	585 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	ADRM1	Q16186	407 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	CYP51A1	Q16850	503 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	RUNDC3A	Q59EK9	446 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	NIPAL3	Q6P499	406 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	DHRS4L2	Q6PKH6	230 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	KLHL24	Q6TFL4	600 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	CREB3L2	Q70SY1	520 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	DHDDS	Q86SQ9	333 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	ARMC8	Q8IUR7	673 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	DEPDC4	Q8N2C3	294 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	WDR31	Q8NA23	367 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	POMGNT2	Q8NAT1	580 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	MFSD8	Q8NHS3	518 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	SLC35B4	Q969S0	331 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	RADIL	Q96JH8	1075 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	PTDSS2	Q9BVG9	487 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	TMEM38A	Q9H6F2	299 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	FAIM	Q9NVQ4	179 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	SELENON	Q9NZV5	590 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	SEC14L4	Q9UDX3	406 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	ANGPT4	Q9Y264	503 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	RASD1	Q9Y272	281 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	USF3	Q68DE3	2245 aa		11.96	□□□□□ -0.49
CDK5RAP3-233	ENST00000584186	PRORSD1P	A6NEY8	169 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FTCDNL1	E5RQL4	147 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZNF587B	E7ETH6	402 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OVOL3	O00110	214 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SASH3	O75995	380 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HEXA	P06865	529 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RGS8	P57771	180 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MTPN	P58546	118 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC25A3	Q00325	362 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	2e-20	■■■□□ 15.9
CDK5RAP3-233	ENST00000584186	NFYC	Q13952	458 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	VEZF1	Q14119	521 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CLEC12B	Q2HXU8	276 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HIKESHI	Q53FT3	197 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ALG10B	Q5I7T1	473 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	EPHX4	Q8IUS5	362 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C17orf78	Q8N4C9	275 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	LSMEM1	Q8N8F7	131 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SMYD1	Q8NB12	490 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HIPK4	Q8NE63	616 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TAAR8	Q969N4	342 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZNF385D	Q9H6B1	395 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TMEM27	Q9HBJ8	222 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC17A5	Q9NRA2	495 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MGAT4B	Q9UQ53	548 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	AMDHD2	Q9Y303	409 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	GMEB1	Q9Y692	573 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ATP23	Q9Y6H3	246 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZAN	Q9Y493	2812 aa		11.95	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		E7EQL1	145 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	UPK3A	O75631	287 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	LGI1	O95970	557 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CD8A	P01732	235 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZNF43	P17038	809 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CLDN17	P56750	224 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PRPS1	P60891	318 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DMTN	Q08495	405 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TNK1	Q13470	666 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C1D	Q13901	141 aa	Known RBP	11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SELPLG	Q14242	412 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	AGAP6	Q5VW22	663 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ULK3	Q6PHR2	472 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C6orf89	Q6UWU4	347 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RETREG3	Q86VR2	466 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C11orf65	Q8NCR3	313 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	STON2	Q8WXE9	905 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC38A4	Q969I6	547 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HS6ST2	Q96MM7	605 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ANKRD27	Q96NW4	1050 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CGREF1	Q99674	301 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	WFDC6	Q9BQY6	131 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	AMBRA1	Q9C0C7	1298 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PIF1	Q9H611	641 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C12orf10	Q9HB07	376 aa		11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TES	Q9UGI8	421 aa	Known RBP	11.94	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	IGKV1D-42	A0A075B6H8	117 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TRAV36DV7	A0A075B6V5	113 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		M0R082	166 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		M0R3H8	397 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms