RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TMEM234Q8WY98 164 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 KISS1RQ969F8 398 aaPredicted RBP13.85□□□□□ -0.19
SKA2-209ENST00000583976 FBXW5Q969U6 566 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 TAMM41Q96BW9 452 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 NDE1Q9NXR1 346 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 PRSS50Q9UI38 385 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 ING1Q9UK53 422 aaPredicted RBP13.85□□□□□ -0.19
SKA2-209ENST00000583976 SLC13A4Q9UKG4 626 aa13.85□□□□□ -0.19
SKA2-209ENST00000583976 ZNF814B7Z6K7 855 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 CXCR6O00574 342 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 DNAJA2O60884 412 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 LYZL6O75951 148 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 ADAP00813 363 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 CD3EP07766 207 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 KDELR2P33947 212 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 EIF1P41567 113 aaKnown RBP13.84□□□□□ -0.19
SKA2-209ENST00000583976 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
SKA2-209ENST00000583976 CRYBA2P53672 197 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 MERTKQ12866 999 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 ZSWIM7Q19AV6 140 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 PGGHGQ32M88 737 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 TMEM176BQ3YBM2 270 aaPredicted RBP13.84□□□□□ -0.19
SKA2-209ENST00000583976 SFRP5Q5T4F7 317 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 CADM2Q8N3J6 435 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 GPR32P1Q8NGA4 272 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 ST8SIA1Q92185 356 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 MRGPRX4Q96LA9 322 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 ZNF300Q96RE9 604 aaPredicted RBP13.84□□□□□ -0.19
SKA2-209ENST00000583976 WFDC6Q9BQY6 131 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 POTEKPQ9BYX7 375 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 FANCFQ9NPI8 374 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 ACER3Q9NUN7 267 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 EGFL7Q9UHF1 273 aa13.84□□□□□ -0.19
SKA2-209ENST00000583976 GDF2Q9UK05 429 aaPredicted RBP13.84□□□□□ -0.19
SKA2-209ENST00000583976 SMAD9O15198 467 aaKnown RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 RAMP1O60894 148 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 UQCRBP14927 111 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 CCNA2P20248 432 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 CD247P20963 164 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 PTNP21246 168 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 ADH6P28332 368 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 COPZ1P61923 177 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 RNPS1Q15287 305 aaKnown RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 STK11Q15831 433 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 SLC25A53Q5H9E4 307 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 BHLHE22Q8NFJ8 381 aaPredicted RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 VANGL1Q8TAA9 524 aaPredicted RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 SMAP2Q8WU79 429 aaPredicted RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 GTPBP3Q969Y2 492 aaKnown RBP13.83□□□□□ -0.2
SKA2-209ENST00000583976 PSD2Q9BQI7 771 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 SLCO5A1Q9H2Y9 848 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 CTPS2Q9NRF8 586 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 NPAP1Q9NZP6 1156 aa13.83□□□□□ -0.2
SKA2-209ENST00000583976 DPRXA6NFQ7 191 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 M0R3H8 397 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 TMCC2O75069 709 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 LGI1O95970 557 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 IFNA14P01570 189 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 TACR3P29371 465 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
SKA2-209ENST00000583976 SPOCK1Q08629 439 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 SELENBP1Q13228 472 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 CYBRD1Q53TN4 286 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 SAMD4BQ5PRF9 694 aaKnown RBP13.82□□□□□ -0.2
SKA2-209ENST00000583976 BHLHA15Q7RTS1 189 aaPredicted RBP13.82□□□□□ -0.2
SKA2-209ENST00000583976 GRINAQ7Z429 371 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 RASSF5Q8WWW0 418 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
SKA2-209ENST00000583976 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 TPD52L3Q96J77 140 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 REG4Q9BYZ8 158 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 TRIM2Q9C040 744 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 ESRP2Q9H6T0 727 aaKnown RBP13.82□□□□□ -0.2
SKA2-209ENST00000583976 TAS2R1Q9NYW7 299 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 SH3GLB1Q9Y371 365 aa13.82□□□□□ -0.2
SKA2-209ENST00000583976 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
SKA2-209ENST00000583976 FAAHO00519 579 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 ZNF682O95780 498 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 FESP07332 822 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 GGT1P19440 569 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 SLC7A1P30825 629 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 SLC1A3P43003 542 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 CDH11P55287 796 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 NCALDP61601 193 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 CEACAM7Q14002 265 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 GTF2IRD2BQ6EKJ0 949 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 GLYATQ6IB77 296 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 WBP2NLQ6ICG8 309 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 GTF2IRD2Q86UP8 949 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 ADGRG3Q86Y34 549 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 RBM45Q8IUH3 476 aaKnown RBP13.81□□□□□ -0.2
SKA2-209ENST00000583976 OR52E4Q8NGH9 312 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 PROX1Q92786 737 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 ARHGDIGQ99819 225 aa13.81□□□□□ -0.2
SKA2-209ENST00000583976 TRAF4Q9BUZ4 470 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms