RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 VAPAQ9P0L0 249 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ERVK-18Q9QC07 812 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 OPTCQ9UBM4 332 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 WARS2Q9UGM6 360 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 KLK13Q9UKR3 277 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 FBXW2Q9UKT8 454 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 IKZF3Q9UKT9 509 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC7A7Q9UM01 511 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 DUSP12Q9UNI6 340 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 SCML2Q9UQR0 700 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 TRAPPC4Q9Y296 219 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 GRIP1Q9Y3R0 1128 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PCDHGA5Q9Y5G8 931 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 PCDHGA1Q9Y5H4 931 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 ORC6Q9Y5N6 252 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 CSAG2Q9Y5P2 127 aa3.44□□□□□ -1.86
SMCHD1-208ENST00000583344 NYNRINQ9P2P1 1898 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 NUP205Q92621 2012 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PCNX3Q9H6A9 2034 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ANKRD36A6QL64 1941 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MYLKQ15746 1914 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PNMA8CA0A1B0GUJ8 204 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ILVBLA1L0T0 632 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ARL5CA6NH57 179 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 C2orf81A6NN90 581 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 C9JVG2 144 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 LOC110117498-PIK3R3F6TDL0 507 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC30A4O14863 429 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 BCKDKO14874 412 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 HAT1O14929 419 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SMAD9O15198 467 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 RAD51BO15315 384 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TAPBPO15533 448 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 KDELR3O43731 214 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SCO2O43819 266 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 VEGFDO43915 354 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 WBP4O75554 376 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 UGT2B17O75795 530 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 KCNK2O95069 426 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SEC24AO95486 1093 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 IGLV3-27P01718 113 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 FTH1P02794 183 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MT-ND1P03886 318 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ALPPP05187 535 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CAPN1P07384 714 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TRAPPC2P0DI81 140 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TRAPPC2BP0DI82 140 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ALPPL2P10696 532 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PRPS2P11908 318 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 NCF1P14598 390 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CD36P16671 472 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GPX2P18283 190 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 EPORP19235 508 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 POLR2EP19388 210 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PRKACGP22612 351 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 RPS3P23396 243 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SERPINB1P30740 379 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 PGFP49763 221 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 IST1P53990 364 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 UGT2B15P54855 530 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MTPNP58546 118 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GMFBP60983 142 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MAXP61244 160 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 VBP1P61758 197 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 IL5RAQ01344 420 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CD300CQ08708 224 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ELP6Q0PNE2 266 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GPR17Q13304 367 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 VEZF1Q14119 521 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GRB14Q14449 540 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ABRAXAS2Q15018 415 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 RBBP7Q16576 425 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 VWC2Q2TAL6 325 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 WSCD2Q2TBF2 565 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 HFEQ30201 348 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 LRIT3Q3SXY7 679 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 IQCCQ4KMZ1 466 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CARD16Q5EG05 197 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 LDLRAP1Q5SW96 308 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ATAD3BQ5T9A4 648 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 OR2T5Q6IEZ7 315 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 FAHD1Q6P587 224 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ERICH5Q6P6B1 374 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SPESP1Q6UW49 350 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SCIMPQ6UWF3 145 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ENPP6Q6UWR7 440 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CERS6Q6ZMG9 384 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 EIF3MQ7L2H7 374 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GDPD3Q7L5L3 318 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 GOLGA7Q7Z5G4 137 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ADIPOR2Q86V24 386 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 CDC20BQ86Y33 519 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 ZDHHC21Q8IVQ6 265 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 MAML2Q8IZL2 1156 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 HS3ST5Q8IZT8 346 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 SLC7A5P1Q8MH63 180 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 STK40Q8N2I9 435 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 METTL4Q8N3J2 472 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 FAM86B1Q8N7N1 296 aa3.43□□□□□ -1.86
SMCHD1-208ENST00000583344 TTC29Q8NA56 475 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms