RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 OR1L4Q8NGR5 311 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 NEIL3Q8TAT5 605 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 UCN3Q969E3 161 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 CYYR1Q96J86 154 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 NPY6RQ99463 290 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 P2RY13Q9BPV8 354 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 SLC39A3Q9BRY0 314 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 GCOM2Q9BZD3 368 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 SLC25A22Q9H936 323 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 FN3KRPQ9HA64 309 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 PLGRKTQ9HBL7 147 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 SGK2Q9HBY8 427 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 HYPKQ9NX55 129 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 PIGLQ9Y2B2 252 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 ASB3Q9Y575 518 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 GTF3C1Q12789 2109 aa3.2□□□□□ -1.9
SMCHD1-205ENST00000581383 BTBD17A6NE02 478 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 CLDN9O95484 217 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 TSPAN12O95859 305 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 DRD3P35462 400 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 TAGLN2P37802 199 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 GLP1RP43220 463 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 KIR2DS4P43632 304 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 VDAC2P45880 294 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 CRYBB1P53674 252 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 NUP107P57740 925 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 TAS2R19P59542 299 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 OGDHQ02218 1023 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 PRSS41Q7RTY9 318 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 FANK1Q8TC84 345 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 SHC3Q92529 594 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 ZNF641Q96N77 438 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 KCNA7Q96RP8 456 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 FMO2Q99518 471 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 TRIM62Q9BVG3 475 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 NANOGQ9H9S0 305 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 RPS6KB2Q9UBS0 482 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 MTRF1LQ9UGC7 380 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 KCNIP3Q9Y2W7 256 aa3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 PRRC2AP48634 2157 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-205ENST00000581383 SYNJ2BP-COX16A0A087WUM0 186 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 E9PBE3 544 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 H0Y9J4 135 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 GOLGA8SH3BPF8 625 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 TOM1O60784 492 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 NPIPB7O75200 414 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 KLF8O95600 359 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ABOP16442 354 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 IL12AP29459 219 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 OPRD1P41143 372 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 SSR1P43307 286 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 WNT4P56705 351 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 HMGN5P82970 282 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 OR5I1Q13606 314 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 NRF1Q16656 503 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 IMMTQ16891 758 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 C2orf83Q53S99 150 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 PHYHD1Q5SRE7 291 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ENPP6Q6UWR7 440 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 RFLNAQ6ZTI6 216 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 MFSD6LQ8IWD5 586 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 FAM83FQ8NEG4 500 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 OR6C4Q8NGE1 309 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 OR9G1Q8NH87 305 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ARPC1AQ92747 370 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ELSPBP1Q96BH3 223 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ROPN1BQ9BZX4 212 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 PPA2Q9H2U2 334 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 ASB8Q9H765 288 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 KCNIP1Q9NZI2 227 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 NYAP2Q9P242 653 aa3.18□□□□□ -1.9
SMCHD1-205ENST00000581383 A0A0G2JLM5 398 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ARHGEF35A5YM69 484 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 OR5B21A6NL26 309 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 PANO1I0J062 215 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 HAS3O00219 553 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 AGPAT2O15120 278 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ZNF861PO60384 105 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 TNFSF13O75888 250 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 FMO3P31513 532 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 BTCP35070 178 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 CTRLP40313 264 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ARRB1P49407 418 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 DLX1P56177 255 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 CKAP4Q07065 602 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ATP6AP1Q15904 470 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 CASC10Q5T4H9 136 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 C1orf94Q6P1W5 598 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms