RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 EVA1AQ9H8M9 152 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 NDUFB11Q9NX14 153 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 NTNG1Q9Y2I2 539 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 C17orf105B2RV13 164 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SLC30A4O14863 429 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 THY1P04216 161 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 IGFBP1P08833 259 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 SP9P0CG40 484 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 PIPP12273 146 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 CKMT1AP12532 417 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SOX3P41225 446 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 PLAURQ03405 335 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 DOC2BQ14184 412 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SNAPC1Q16533 368 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 DECR1Q16698 335 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 MINDY4Q4G0A6 757 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 ZNF730Q6ZMV8 503 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 GDF7Q7Z4P5 450 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 IFI44Q8TCB0 444 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 CCDC74BQ96LY2 380 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SEC22CQ9BRL7 303 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 MS4A7Q9GZW8 240 aaPredicted RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 Q9N2J8 555 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 SRPK3Q9UPE1 567 aa12.66□□□□□ -0.38
RNF43-202ENST00000577625 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
RNF43-202ENST00000577625 M0R129 80 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 FMO6PO60774 539 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 LALBAP00709 142 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 CFDP00746 253 aaPredicted RBP12.65□□□□□ -0.38
RNF43-202ENST00000577625 ADRA2AP08913 450 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 CT45A8P0DMV1 189 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 CT45A9P0DMV2 189 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 RNF144AP50876 292 aaPredicted RBP12.65□□□□□ -0.38
RNF43-202ENST00000577625 ACY1Q03154 408 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 ZNF528Q3MIS6 628 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 CT45A2Q5DJT8 189 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 NKAIN4Q8IVV8 208 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 CDH26Q8IXH8 852 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 OR11H7Q8NGC8 314 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 INTS12Q96CB8 462 aaKnown RBP12.65□□□□□ -0.38
RNF43-202ENST00000577625 SMOC1Q9H4F8 434 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 C11orf16Q9NQ32 467 aa12.65□□□□□ -0.38
RNF43-202ENST00000577625 PNO1Q9NRX1 252 aaKnown RBP12.65□□□□□ -0.38
RNF43-202ENST00000577625 C7orf66A4D0T2 115 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 A8MXK9 166 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 PRG2P13727 222 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
RNF43-202ENST00000577625 OMPP47874 163 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 RFX3P48380 749 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SNRPGP62308 76 aaKnown RBP12.64□□□□□ -0.39
RNF43-202ENST00000577625 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 NNATQ16517 81 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 KIF26BQ2KJY2 2108 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 CD276Q5ZPR3 534 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 RHBDD2Q6NTF9 364 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 COX15Q7KZN9 410 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 PRICKLE2Q7Z3G6 844 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 OR8D4Q8NGM9 314 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 PIGXQ8TBF5 258 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 OR6C1Q96RD1 312 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 MED18Q9BUE0 208 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 B3GAT2Q9NPZ5 323 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TESQ9UGI8 421 aaKnown RBP12.64□□□□□ -0.39
RNF43-202ENST00000577625 TCRBV16S1A1N1A0A5B0 115 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TRAPPC13A5PLN9 417 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TIAF1O95411 115 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 NTN1O95631 604 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 DHFRP00374 187 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SYPP08247 313 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 DRD5P21918 477 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 HTR2AP28223 471 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 AKR1D1P51857 326 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SPHARQ15513 63 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 ETFDHQ16134 617 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TMEM201Q5SNT2 666 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 TMEM151BQ8IW70 566 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 ZNF321PQ8N8H1 164 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 ZSCAN1Q8NBB4 408 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 OR2T4Q8NH00 348 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SENP5Q96HI0 755 aaPredicted RBP12.64□□□□□ -0.39
RNF43-202ENST00000577625 G6PC3Q9BUM1 346 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SLC22A11Q9NSA0 550 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 CLN6Q9NWW5 311 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SIDT1Q9NXL6 827 aaKnown RBP12.64□□□□□ -0.39
RNF43-202ENST00000577625 COA4Q9NYJ1 87 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 CTSFQ9UBX1 484 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
RNF43-202ENST00000577625 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms