RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
RAB40B-204ENST00000571554 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 SLC17A5Q9NRA2 495 aa12.06□□□□□ -0.48
RAB40B-204ENST00000571554 HEATR1Q9H583 2144 aaKnown RBP12.05□□□□□ -0.48
RAB40B-204ENST00000571554 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 FAM171A2A8MVW0 826 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 HMGB1P1B2RPK0 211 aaPredicted RBP12.05□□□□□ -0.48
RAB40B-204ENST00000571554 FTCDNL1E5RQL4 147 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 LGI1O95970 557 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 PNMTP11086 282 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 ETS2P15036 469 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 GTF2E2P29084 291 aaKnown RBP12.05□□□□□ -0.48
RAB40B-204ENST00000571554 MPGP29372 298 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 ATP4BP51164 291 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 SF3A3Q12874 501 aaKnown RBP eCLIP12.05□□□□□ -0.48
RAB40B-204ENST00000571554 SELPLGQ14242 412 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 ZSWIM7Q19AV6 140 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 DLEU7Q6UYE1 221 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 LINGO2Q7L985 606 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 EPHX4Q8IUS5 362 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 STK35Q8TDR2 534 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 RADILQ96JH8 1075 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 MAGEB18Q96M61 343 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 AMBRA1Q9C0C7 1298 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 ATP23Q9Y6H3 246 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 PLCE1Q9P212 2302 aa12.05□□□□□ -0.48
RAB40B-204ENST00000571554 EVPLLA8MZ36 301 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TMCC2O75069 709 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 UPK3AO75631 287 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 OPN1SWP03999 348 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
RAB40B-204ENST00000571554 SLC6A2P23975 617 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 PTAFRP25105 342 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 PRKAR1BP31321 381 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 CLDN17P56750 224 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 MTPNP58546 118 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 NCALDP61601 193 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TUBA1BP68363 451 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TUBA4AP68366 448 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 IL1RL1Q01638 556 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TGFBR3Q03167 851 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 ADRM1Q16186 407 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 KRTAP21-3Q3LHN1 58 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 ALG10BQ5I7T1 473 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 DHRS4L2Q6PKH6 230 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 KLHL24Q6TFL4 600 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TUBA1AQ71U36 451 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 DHDDSQ86SQ9 333 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 KRT73Q86Y46 540 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 POMGNT2Q8NAT1 580 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 SMYD1Q8NB12 490 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 MFSD8Q8NHS3 518 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 TAAR8Q969N4 342 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 HS6ST2Q96MM7 605 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 CACNG6Q9BXT2 260 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 FAIMQ9NVQ4 179 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 B3GALT5Q9Y2C3 310 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 AMDHD2Q9Y303 409 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 CR1P17927 2039 aa12.04□□□□□ -0.48
RAB40B-204ENST00000571554 IGKV1D-42A0A075B6H8 117 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 A0A096LPE4 126 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 A0A0G2JND7 137 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 M0R082 166 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 SSX4O60224 188 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 SASH3O75995 380 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 GPX2P18283 190 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 GRPRP30550 384 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 TTKP33981 857 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 FABP6P51161 128 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 DMTNQ08495 405 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 CYP51A1Q16850 503 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 RUNDC3AQ59EK9 446 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 AGAP6Q5VW22 663 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 SSX8Q7RTT4 187 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ARMC8Q8IUR7 673 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 C1orf162Q8NEQ5 155 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 OR1K1Q8NGR3 316 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ZNF417Q8TAU3 575 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ZNF587Q96SQ5 575 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 DHRS9Q9BPW9 319 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ZNF385DQ9H6B1 395 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 LEF1Q9UJU2 399 aaPredicted RBP12.03□□□□□ -0.48
RAB40B-204ENST00000571554 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 MGAT4BQ9UQ53 548 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 NDUFAF1Q9Y375 327 aa12.03□□□□□ -0.48
RAB40B-204ENST00000571554 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms