RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 OR1Q1Q15612 314 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 DUSP7Q16829 419 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 NANOGP8Q6NSW7 305 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 PRSS57Q6UWY2 283 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 RANBP3LQ86VV4 465 aaPredicted RBP17.85■□□□□ 0.45
CLK3-225ENST00000569063 P3H2Q8IVL5 708 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 POMGNT2Q8NAT1 580 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 SMYD1Q8NB12 490 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 C1orf162Q8NEQ5 155 aaPredicted RBP17.85■□□□□ 0.45
CLK3-225ENST00000569063 OR10A6Q8NH74 314 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 TAAR8Q969N4 342 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 SLC25A36Q96CQ1 311 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 ZNF469Q96JG9 3925 aaPredicted RBP17.85■□□□□ 0.45
CLK3-225ENST00000569063 SH3GL1Q99961 368 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 GSX2Q9BZM3 304 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 SLCO5A1Q9H2Y9 848 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 NANOGQ9H9S0 305 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 TMEM27Q9HBJ8 222 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 NPAP1Q9NZP6 1156 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 SLC25A15Q9Y619 301 aa17.85■□□□□ 0.45
CLK3-225ENST00000569063 PRR14LQ5THK1 2151 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 A0A087WUJ7 227 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 A0A0B4J2E0 115 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 A0A1B0GX12 115 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 BBIP1A8MTZ0 92 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 CLOCKO15516 846 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 FMO6PO60774 539 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 MPGP29372 298 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 TGFBR3Q03167 851 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 ZNF672Q499Z4 452 aaPredicted RBP17.84■□□□□ 0.45
CLK3-225ENST00000569063 SWT1Q5T5J6 900 aaKnown RBP17.84■□□□□ 0.45
CLK3-225ENST00000569063 C1QTNF12Q5T7M4 302 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 FAM69AQ5T7M9 428 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 PATL1Q86TB9 770 aaKnown RBP17.84■□□□□ 0.45
CLK3-225ENST00000569063 EPHX4Q8IUS5 362 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 C17orf78Q8N4C9 275 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 OR8J3Q8NGG0 315 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 OR52N5Q8NH56 324 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 TMEM171Q8WVE6 324 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 LRRC58Q96CX6 371 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 BOD1Q96IK1 185 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 ARHGDIGQ99819 225 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 SELENONQ9NZV5 590 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 KLHL14Q9P2G3 628 aa17.84■□□□□ 0.45
CLK3-225ENST00000569063 MAP1AP78559 2803 aaPredicted RBP17.84■□□□□ 0.45
CLK3-225ENST00000569063 VPS13CQ709C8 3753 aa17.83■□□□□ 0.45
CLK3-225ENST00000569063 DSCAMO60469 2012 aa17.83■□□□□ 0.45
CLK3-225ENST00000569063 TRAV36DV7A0A075B6V5 113 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 FXYD1O00168 92 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 GTF2E2P29084 291 aaKnown RBP17.83■□□□□ 0.44
CLK3-225ENST00000569063 SF3A3Q12874 501 aaKnown RBP eCLIP17.83■□□□□ 0.441e-6■■■■■ 38.4
CLK3-225ENST00000569063 MAPRE2Q15555 327 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 VMACQ2NL98 169 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 Q5PR19 223 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 INTS11Q5TA45 600 aaKnown RBP17.83■□□□□ 0.44
CLK3-225ENST00000569063 GPR32P1Q8NGA4 272 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 OR6S1Q8NH40 331 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 FBXW5Q969U6 566 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 CXorf56Q9H5V9 222 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 ZNF701Q9NV72 531 aaPredicted RBP17.83■□□□□ 0.44
CLK3-225ENST00000569063 B3GALT5Q9Y2C3 310 aa17.83■□□□□ 0.44
CLK3-225ENST00000569063 LOC102725191A0A1B0GVB3 256 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 OR6C65A6NJZ3 312 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 MRASO14807 208 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 AIM2O14862 343 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 OPN1SWP03999 348 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 DANCRP0C864 163 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 MDH1P40925 334 aaKnown RBP17.82■□□□□ 0.44
CLK3-225ENST00000569063 CDH12P55289 794 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 RIPPLY3P57055 190 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 NRF1Q16656 503 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 MMEL1Q495T6 779 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 REP15Q6BDI9 236 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 ZNF613Q6PF04 617 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 CCDC80Q76M96 950 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 ABHD12BQ7Z5M8 362 aaPredicted RBP17.82■□□□□ 0.44
CLK3-225ENST00000569063 CALHM3Q86XJ0 350 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 WDR31Q8NA23 367 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 KBTBD8Q8NFY9 601 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 NEUROG1Q92886 237 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 PERPQ96FX8 193 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 RADILQ96JH8 1075 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 OXGR1Q96P68 337 aa17.82■□□□□ 0.44
CLK3-225ENST00000569063 SHISA9B4DS77 424 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 M0R3H8 397 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SLC22A2O15244 555 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 ZNF43P17038 809 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 PTAFRP25105 342 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 PTH2RP49190 550 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SELENOPP49908 381 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 MFSD13AQ14CX5 517 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 RABL3Q5HYI8 236 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 C9orf135Q5VTT2 229 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 KLHL17Q6TDP4 642 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 TMEM108Q6UXF1 575 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 H1FNTQ75WM6 255 aaPredicted RBP17.81■□□□□ 0.44
CLK3-225ENST00000569063 SNX32Q86XE0 403 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 KDM8Q8N371 416 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 OR6T1Q8NGN1 323 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SMAP2Q8WU79 429 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms