RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CBLL1Q75N03 491 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 GALNT5Q7Z7M9 940 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 FAM86B1Q8N7N1 296 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 CCDC197Q8NCU1 140 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 OR9K2Q8NGE7 335 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 PROX1Q92786 737 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 ZHX1-C8orf76Q96EF9 292 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 KCTD14Q9BQ13 255 aaPredicted RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 AMBRA1Q9C0C7 1298 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 LIME1Q9H400 295 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 EVA1AQ9H8M9 152 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 ADA2Q9NZK5 511 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 NOSIPQ9Y314 301 aaKnown RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 ROS1P08922 2347 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 CADP27708 2225 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 TRAPPC13A5PLN9 417 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 DEFB108AA8MXU0 73 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 M0R082 166 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 FFAR1O14842 300 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 CHP2O43745 196 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 SERPINA1P01009 418 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 HLA-DOBP13765 273 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 TCN1P20061 433 aaPredicted RBP12.28□□□□□ -0.44
TPM1-230ENST00000561266 SFRP5Q5T4F7 317 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 GKAP1Q5VSY0 366 aaPredicted RBP12.28□□□□□ -0.44
TPM1-230ENST00000561266 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 CREB3L2Q70SY1 520 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 PGAM4Q8N0Y7 254 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 LRRC17Q8N6Y2 441 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 ZNF417Q8TAU3 575 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 SLC41A3Q96GZ6 507 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 ZNF587Q96SQ5 575 aaPredicted RBP12.28□□□□□ -0.44
TPM1-230ENST00000561266 CDRT15Q96T59 188 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 TMEM43Q9BTV4 400 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 ZNF426Q9BUY5 554 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 TAPBPLQ9BX59 468 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 SPAG4Q9NPE6 437 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
TPM1-230ENST00000561266 RASSF1Q9NS23 344 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 C6orf203Q9P0P8 240 aaPredicted RBP12.28□□□□□ -0.44
TPM1-230ENST00000561266 RIMS3Q9UJD0 308 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 AP3M1Q9Y2T2 418 aa12.28□□□□□ -0.44
TPM1-230ENST00000561266 GSTA4O15217 222 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 LYZL6O75951 148 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 ZNF682O95780 498 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 HRGP04196 525 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 PSMB1P20618 241 aaKnown RBP12.27□□□□□ -0.45
TPM1-230ENST00000561266 UGT2B15P54855 530 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 FXNQ16595 210 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
TPM1-230ENST00000561266 FAM69AQ5T7M9 428 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 TSPO2Q5TGU0 170 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 GLYATQ6IB77 296 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 Q6ZT83 130 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 LINGO2Q7L985 606 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 GPAT4Q86UL3 456 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 DEFB107AQ8IZN7 70 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 PFN4Q8NHR9 129 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 TMEM255BQ8WV15 326 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 RASSF5Q8WWW0 418 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 S100PBPQ96BU1 408 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 NSL1Q96IY1 281 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 HSH2DQ96JZ2 352 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
TPM1-230ENST00000561266 ACTR6Q9GZN1 396 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 SLC7A10Q9NS82 523 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 MAN2C1Q9NTJ4 1040 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 EMC3Q9P0I2 261 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 RHCGQ9UBD6 479 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 SLC9A8Q9Y2E8 581 aa12.27□□□□□ -0.45
TPM1-230ENST00000561266 B2RBV5 119 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 PDLIM1O00151 329 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 KPNA4O00629 521 aaPredicted RBP12.26□□□□□ -0.45
TPM1-230ENST00000561266 GPR171O14626 319 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 KLF4O43474 513 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 PIP5K1CO60331 668 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 PRSS23O95084 383 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 CH25HO95992 272 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 ITGA5P08648 1049 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 HSD17B1P14061 328 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 PEX19P40855 299 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 SELENOPP49908 381 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 C9orf135Q5VTT2 229 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 CASP12Q6UXS9 341 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 SLC46A3Q7Z3Q1 461 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 STK32CQ86UX6 486 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 TMEM200AQ86VY9 491 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 MEX3DQ86XN8 651 aaKnown RBP12.26□□□□□ -0.45
TPM1-230ENST00000561266 ZNF100Q8IYN0 542 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 ZNF433Q8N7K0 673 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms