RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 POMGNT2Q8NAT1 580 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 C1orf162Q8NEQ5 155 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC35B4Q969S0 331 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RADILQ96JH8 1075 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CPPED1Q9BRF8 314 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 FAIMQ9NVQ4 179 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM45AQ9NWC5 275 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 CORO2BQ9UQ03 480 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 MGAT4BQ9UQ53 548 aa16.72■□□□□ 0.27
TNFRSF1A-212ENST00000539372 A0A1B0GWA3 101 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 EVPLLA8MZ36 301 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 FTCDNL1E5RQL4 147 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NDUFS7O75251 213 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PNMTP11086 282 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 GPX2P18283 190 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SLC6A2P23975 617 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SELENOPP49908 381 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ADRM1Q16186 407 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 HIKESHIQ53FT3 197 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NIPAL3Q6P499 406 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 B3GLCTQ6Y288 498 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 DTX2Q86UW9 622 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 EPHX4Q8IUS5 362 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 C17orf78Q8N4C9 275 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 MFSD8Q8NHS3 518 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SPATA5L1Q9BVQ7 753 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RABEP2Q9H5N1 569 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 PIF1Q9H611 641 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 TMEM38AQ9H6F2 299 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 VIPAS39Q9H9C1 493 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 NPHS2Q9NP85 383 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 SEC14L4Q9UDX3 406 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 GDF2Q9UK05 429 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 RASD1Q9Y272 281 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 AMDHD2Q9Y303 409 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 GMEB1Q9Y692 573 aa16.71■□□□□ 0.27
TNFRSF1A-212ENST00000539372 VAMP5O95183 116 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 IGHV4-39P01824 125 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 H2AFXP16104 143 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 GTF2E2P29084 291 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ACVR1BP36896 505 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 IRX1P78414 480 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RUNDC3AQ59EK9 446 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 AGAP6Q5VW22 663 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C6orf89Q6UWU4 347 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DHDDSQ86SQ9 333 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 MAPK1IP1LQ8NDC0 245 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ALKBH3Q96Q83 286 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 LEF1Q9UJU2 399 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RNF223E7ERA6 249 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZNF587BE7ETH6 402 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 UPK3AO75631 287 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 LGI1O95970 557 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CBLP22681 906 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 PCSK6P29122 969 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 CLDN17P56750 224 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 PRPS1P60891 318 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SELPLGQ14242 412 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ALG10BQ5I7T1 473 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 KLHL24Q6TFL4 600 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 LINGO2Q7L985 606 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ABHD12BQ7Z5M8 362 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DEPDC4Q8N2C3 294 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 LSMEM1Q8N8F7 131 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 HIPK4Q8NE63 616 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TAAR8Q969N4 342 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 HS6ST2Q96MM7 605 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZNF607Q96SK3 696 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DHRS9Q9BPW9 319 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 WFDC6Q9BQY6 131 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZNF385DQ9H6B1 395 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 C12orf10Q9HB07 376 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SLC13A4Q9UKG4 626 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ANGPT4Q9Y264 503 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 B3GALT5Q9Y2C3 310 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ATP23Q9Y6H3 246 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 NAV3Q8IVL0 2385 aa16.69■□□□□ 0.26
TNFRSF1A-212ENST00000539372 IGKV1D-42A0A075B6H8 117 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 A0A0G2JND7 137 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 PRORSD1PA6NEY8 169 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 M0R082 166 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ANGPT2O15123 496 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 EDF1O60869 148 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 TTKP33981 857 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 FABP6P51161 128 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 MTPNP58546 118 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 NCALDP61601 193 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 IL1RL1Q01638 556 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DMTNQ08495 405 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ETFDHQ16134 617 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 RETREG3Q86VR2 466 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ARMC8Q8IUR7 673 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SMYD1Q8NB12 490 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 ZNF417Q8TAU3 575 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 DNAJA4Q8WW22 397 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 STON2Q8WXE9 905 aa16.68■□□□□ 0.26
TNFRSF1A-212ENST00000539372 SLC38A4Q969I6 547 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms