RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RORCP51449 518 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 PNLIPRP2P54317 469 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CTBP2P56545 445 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CDC42P60953 191 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SNRPGP62308 76 aaKnown RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 RNF4P78317 190 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CDK5Q00535 292 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SKP2Q13309 424 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TNK1Q13470 666 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 RTP5Q14D33 572 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ESCO2Q56NI9 601 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CEP78Q5JTW2 689 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 KIRREL2Q6UWL6 708 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ZNF730Q6ZMV8 503 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SPATC1Q76KD6 591 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 PRICKLE2Q7Z3G6 844 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 GGHQ92820 318 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 FGF11Q92914 225 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 UBE2FQ969M7 185 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CCNL2Q96S94 520 aaPredicted RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 CHCHD6Q9BRQ6 235 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 MRPL39Q9NYK5 338 aaKnown RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 IGHV1-45A0A0A0MS14 117 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 LOC101059948A0A1B0GTJ6 334 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 OR6C70A6NIJ9 312 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TMEM200CA6NKL6 621 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 PRKNO60260 465 aaPredicted RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 NOS1APO75052 506 aaPredicted RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 ICOSLGO75144 302 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SOX14O95416 240 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CSTAP01040 98 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 IGHEP01854 428 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 MYL9P24844 172 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TGFBR1P36897 503 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 HTR2BP41595 481 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 RAD52P43351 418 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 RFX2P48378 723 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 NR0B1P51843 470 aaKnown RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 SLC26A5P58743 744 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 EFNB1P98172 346 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 FAPQ12884 760 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 QPRTQ15274 297 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 CD226Q15762 336 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SLC25A30Q5SVS4 291 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 NXNL2Q5VZ03 156 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 APOOLQ6UXV4 268 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ZNF620Q6ZNG0 422 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TMPRSS11FQ6ZWK6 438 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 PPP1R32Q7Z5V6 425 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 SLC51BQ86UW2 128 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 NRMQ8IXM6 262 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 IL22RA1Q8N6P7 574 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ZNF614Q8N883 585 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 OR11G2Q8NGC1 345 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 OR9Q1Q8NGQ5 310 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 THAP3Q8WTV1 239 aaPredicted RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 TMEM239Q8WW34 195 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ASB15Q8WXK1 588 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 OMA1Q96E52 524 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 HS6ST2Q96MM7 605 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 Q96MT0 163 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 GAL3ST4Q96RP7 486 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 COQ7Q99807 217 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TTYH2Q9BSA4 534 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 POLDIP3Q9BY77 421 aaKnown RBP8.07□□□□□ -1.12
DDB1-213ENST00000539332 OR51E2Q9H255 320 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 RNF121Q9H920 327 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TMEM27Q9HBJ8 222 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 ING3Q9NXR8 418 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 B3GNT2Q9NY97 397 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 IL20Q9NYY1 176 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 AASSQ9UDR5 926 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TMEM5Q9Y2B1 443 aa8.07□□□□□ -1.12
DDB1-213ENST00000539332 TRABD2BA6NFA1 517 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 SOCS6O14544 535 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 FADS1O60427 444 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 ZNF780AO75290 641 aaPredicted RBP8.06□□□□□ -1.12
DDB1-213ENST00000539332 IGF2P01344 180 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 C1QBP02746 253 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 IGFBP1P08833 259 aaPredicted RBP8.06□□□□□ -1.12
DDB1-213ENST00000539332 UBL4AP11441 157 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 COX6A1P12074 109 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 ENPP1P22413 925 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 PRKACBP22694 351 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 PTBP1P26599 531 aaKnown RBP eCLIP8.06□□□□□ -1.12
DDB1-213ENST00000539332 C21orf33P30042 268 aaPredicted RBP8.06□□□□□ -1.12
DDB1-213ENST00000539332 OTX2P32243 289 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 GIPRP48546 466 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 IDH2P48735 452 aaKnown RBP8.06□□□□□ -1.12
DDB1-213ENST00000539332 GZMKP49863 264 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
DDB1-213ENST00000539332 PLCXD2Q0VAA5 305 aa8.06□□□□□ -1.12
DDB1-213ENST00000539332 FOXC1Q12948 553 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms