RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 C3orf49Q96BT1 292 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 TMEM19Q96HH6 336 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 MDFIQ99750 246 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 KATNB1Q9BVA0 655 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 WDR55Q9H6Y2 383 aaPredicted RBP7.57□□□□□ -1.2
DDB1-212ENST00000538470 TPT1P8Q9HAU6 139 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 RLIMQ9NVW2 624 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 TMEM160Q9NX00 188 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 RCE1Q9Y256 329 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 RASD1Q9Y272 281 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 FKBP7Q9Y680 259 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 ATP23Q9Y6H3 246 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 MALRD1Q5VYJ5 2156 aa7.57□□□□□ -1.2
DDB1-212ENST00000538470 ATP6V1G2-DDX39BF2Z307 99 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 KLF11O14901 512 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 NPIPB7O75200 414 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 KRT33AO76009 404 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 PDE5AO76074 875 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 TFPTP0C1Z6 253 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 GKN3PP0CG01 181 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 KITP10721 976 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 BMP2P12643 396 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 NCF2P19878 526 aaPredicted RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 GTF2E2P29084 291 aaKnown RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 P2RY4P51582 365 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 EFNA4P52798 201 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 UBE2NP61088 152 aaKnown RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 SNRPD2P62316 118 aaKnown RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 TMEM249Q2WGJ8 235 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 CHRFAM7AQ494W8 412 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 C6orf10Q5SRN2 563 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 C9orf135Q5VTT2 229 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 C1orf140Q5VVS0 124 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 TMEM225Q6GV28 225 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 C6orf89Q6UWU4 347 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 GPAT4Q86UL3 456 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 MIER2Q8N344 545 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 CADM2Q8N3J6 435 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 ZIC4Q8N9L1 334 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 MFSD8Q8NHS3 518 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 MAGEE2Q8TD90 523 aaPredicted RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 SLC38A5Q8WUX1 472 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 FAM168AQ92567 244 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 ZNF385AQ96PM9 386 aaKnown RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 SLC38A2Q96QD8 506 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 TNFRSF13CQ96RJ3 184 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 KCNS3Q9BQ31 491 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 C12orf10Q9HB07 376 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 BCL2L10Q9HD36 194 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 MYOZ1Q9NP98 299 aaPredicted RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 A4GALTQ9NPC4 353 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 YAE1D1Q9NRH1 226 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 SLC6A13Q9NSD5 602 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 TMEM45AQ9NWC5 275 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 ADPRHL2Q9NX46 363 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 LPAR3Q9UBY5 353 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 FBXO9Q9UK97 447 aaPredicted RBP7.56□□□□□ -1.2
DDB1-212ENST00000538470 CDC42EP3Q9UKI2 254 aa7.56□□□□□ -1.2
DDB1-212ENST00000538470 IGHV1-18A0A0C4DH31 117 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 FTCDNL1E5RQL4 147 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 NDUFS8O00217 210 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 UBDO15205 165 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 AKAP8O43823 692 aaKnown RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 FAM157CP0CG43 387 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 PNMTP11086 282 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 HOXB1P14653 301 aaPredicted RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 ETS2P15036 469 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 PTNP21246 168 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 STX1BP61266 288 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 TBRG1Q3YBR2 411 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 SLC9B1Q4ZJI4 515 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 ZNF311Q5JNZ3 666 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 HMBOX1Q6NT76 420 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 CREB3L2Q70SY1 520 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 ADPRHL1Q8NDY3 354 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 LRRC8CQ8TDW0 803 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 C10orf105Q8TEF2 133 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 GTF2H4Q92759 462 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 VPS33AQ96AX1 596 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 AURKBQ96GD4 344 aaPredicted RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 PIMREGQ9BSJ6 248 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 LINC00470Q9BZP3 86 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 INTS9Q9NV88 658 aaKnown RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 CRNNQ9UBG3 495 aaPredicted RBP7.55□□□□□ -1.2
DDB1-212ENST00000538470 RPS6KB2Q9UBS0 482 aa7.55□□□□□ -1.2
DDB1-212ENST00000538470 RPL36A-HNRNPH2H7BZ11 118 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 CLIC1O00299 241 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 AIM2O14862 343 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms