RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CREB3L2Q70SY1 520 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 KRT73Q86Y46 540 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 DEPDC4Q8N2C3 294 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 KDM8Q8N371 416 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 C17orf78Q8N4C9 275 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 MAPK1IP1LQ8NDC0 245 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 CKAP2Q8WWK9 683 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
RTN3P1-201ENST00000536295 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 VAMP5O95183 116 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 PNMTP11086 282 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 CBLP22681 906 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC6A2P23975 617 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 NCALDP61601 193 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 EGR4Q05215 589 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 AGAP6Q5VW22 663 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 ABHD12BQ7Z5M8 362 aaPredicted RBP12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 DTX2Q86UW9 622 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 MAGEB18Q96M61 343 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 DHRS9Q9BPW9 319 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 ARGLU1Q9NWB6 273 aaPredicted RBP12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 CORO2BQ9UQ03 480 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 RASD1Q9Y272 281 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 B3GALT5Q9Y2C3 310 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
RTN3P1-201ENST00000536295 FTCDNL1E5RQL4 147 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF587BE7ETH6 402 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 LGI1O95970 557 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 WNT11O96014 354 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 GPX2P18283 190 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 TTKP33981 857 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 FABP6P51161 128 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 CLDN17P56750 224 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 PRPS1P60891 318 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 IL1RL1Q01638 556 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 ETFDHQ16134 617 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 DHDDSQ86SQ9 333 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 FBXL14Q8N1E6 418 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 HTRA1Q92743 480 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 TAAR8Q969N4 342 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 CACNG6Q9BXT2 260 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 PIF1Q9H611 641 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 TMEM38AQ9H6F2 299 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 TMEM45AQ9NWC5 275 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
RTN3P1-201ENST00000536295 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 PRORSD1PA6NEY8 169 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 M0R082 166 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ANGPT2O15123 496 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 SSX4O60224 188 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 UPK3AO75631 287 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 SERPINB7O75635 380 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF43P17038 809 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 MTPNP58546 118 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 IRX1P78414 480 aaPredicted RBP12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 C1DQ13901 141 aaKnown RBP12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ADRM1Q16186 407 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 CYP51A1Q16850 503 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 RUNDC3AQ59EK9 446 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 MUC15Q8N387 334 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 HIPK4Q8NE63 616 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 OR1K1Q8NGR3 316 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 DNAJA4Q8WW22 397 aaPredicted RBP12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 SLC38A4Q969I6 547 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
RTN3P1-201ENST00000536295 REG4Q9BYZ8 158 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms