RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 AURKBQ96GD4 344 aaPredicted RBP11.5□□□□□ -0.57
RTN3-207ENST00000536011 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
RTN3-207ENST00000536011 OR52B2Q96RD2 323 aa11.5□□□□□ -0.57
RTN3-207ENST00000536011 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
RTN3-207ENST00000536011 RPS6KB2Q9UBS0 482 aa11.5□□□□□ -0.57
RTN3-207ENST00000536011 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
RTN3-207ENST00000536011 ATRQ13535 2644 aa11.5□□□□□ -0.57
RTN3-207ENST00000536011 ELOA3DA6NLF2 546 aaPredicted RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 CLIC1O00299 241 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 OR2T1O43869 369 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 NDUFS7O75251 213 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 IFNA2P01563 188 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 BMP2P12643 396 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 ETS2P15036 469 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 SLC25A16P16260 332 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 CDH2P19022 906 aaPredicted RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 IRX1P78414 480 aaPredicted RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 BNIP2Q12982 314 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 RGNQ15493 299 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 ELOA3BQ3SY89 546 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 MAVSQ7Z434 540 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 SERPINA11Q86U17 422 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 CLIP4Q8N3C7 705 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 ZIC4Q8N9L1 334 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 ELOA3Q8NG57 546 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 OR9I1Q8NGQ6 314 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 MFSD8Q8NHS3 518 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 GTF2H4Q92759 462 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 C3orf49Q96BT1 292 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 C7orf26Q96N11 449 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 ZNF385AQ96PM9 386 aaKnown RBP11.49□□□□□ -0.57
RTN3-207ENST00000536011 SPATA5L1Q9BVQ7 753 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 C1QTNF6Q9BXI9 259 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 C12orf10Q9HB07 376 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 TMBIM4Q9HC24 238 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 TCF7L2Q9NQB0 619 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 FKBP7Q9Y680 259 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 USH1CQ9Y6N9 552 aa11.49□□□□□ -0.57
RTN3-207ENST00000536011 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 AKAP8O43823 692 aaKnown RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 NPIPB7O75200 414 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 CRYAAP02489 173 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 PNMTP11086 282 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 PRG2P13727 222 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 PTNP21246 168 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 PRKAR1BP31321 381 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 NCALDP61601 193 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 SNRPD2P62316 118 aaKnown RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 SLC25A3Q00325 362 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 GTDC1Q4AE62 458 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 GCNT6Q5T4J0 391 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 HMBOX1Q6NT76 420 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 SLC2A7Q6PXP3 512 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 EPGNQ6UW88 154 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 B3GLCTQ6Y288 498 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 OR10H5Q8NGA6 315 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 FAM168AQ92567 244 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 KATNB1Q9BVA0 655 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 PAIP1Q9H074 479 aaKnown RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 SELENONQ9NZV5 590 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 FBXO9Q9UK97 447 aaPredicted RBP11.48□□□□□ -0.57
RTN3-207ENST00000536011 RCE1Q9Y256 329 aa11.48□□□□□ -0.57
RTN3-207ENST00000536011 ABCA1O95477 2261 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 CHD3Q12873 2000 aaKnown RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 AIM2O14862 343 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 ZNF43P17038 809 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 SELENOPP49908 381 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 P2RY4P51582 365 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 EFNA4P52798 201 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 C1DQ13901 141 aaKnown RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 C3orf36Q3SXR2 165 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 TBRG1Q3YBR2 411 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 NIPAL3Q6P499 406 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 C6orf89Q6UWU4 347 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 MAGEE2Q8TD90 523 aaPredicted RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 DNAJA4Q8WW22 397 aaPredicted RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 SLC38A4Q969I6 547 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 MAL2Q969L2 176 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 SLC25A36Q96CQ1 311 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 ALKBH3Q96Q83 286 aaPredicted RBP11.47□□□□□ -0.57
RTN3-207ENST00000536011 SLC38A2Q96QD8 506 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 LINC00470Q9BZP3 86 aa11.47□□□□□ -0.57
RTN3-207ENST00000536011 SLC13A4Q9UKG4 626 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms