RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 F12P00748 615 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ALDOCP09972 364 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ETFAP13804 333 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 PPIBP23284 216 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 EDNRAP25101 427 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SERPINF1P36955 418 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 CDKN2CP42773 168 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 POLR2JP52435 117 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 VLDLRP98155 873 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SPOCK1Q08629 439 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 GGTLC2Q14390 218 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 COX20Q5RI15 118 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 FAM166AQ6J272 317 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SEZ6L2Q6UXD5 910 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 VRK2Q86Y07 508 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 CCDC36Q8IYA8 594 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 BHLHE22Q8NFJ8 381 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 OR10H5Q8NGA6 315 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 OR4F15Q8NGB8 312 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 NANOS1Q8WY41 292 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC38A4Q969I6 547 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ALKBH3Q96Q83 286 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC38A2Q96QD8 506 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 EPYCQ99645 322 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 MDFIQ99750 246 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 KATNB1Q9BVA0 655 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 C20orf27Q9GZN8 174 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 DYNLRB1Q9NP97 96 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 CORO2BQ9UQ03 480 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 SPEF1Q9Y4P9 236 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 PCDHB14Q9Y5E9 798 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 NOX1Q9Y5S8 564 aa11.6□□□□□ -0.55
CLSTN3-205ENST00000535452 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 PRORSD1PA6NEY8 169 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 AIM2O14862 343 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 ENTPD5O75356 428 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 BCAS1O75363 584 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 PNMTP11086 282 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 APEHP13798 732 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 TBRG1Q3YBR2 411 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 ANKRD16Q6P6B7 361 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 UGT2A3Q6UWM9 527 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 CREB3L2Q70SY1 520 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 PIK3C3Q8NEB9 887 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 IL17RDQ8NFM7 739 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 OR1K1Q8NGR3 316 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 MFSD8Q8NHS3 518 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC38A5Q8WUX1 472 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 DNAJA4Q8WW22 397 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC35B4Q969S0 331 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 C3orf49Q96BT1 292 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 TMEM19Q96HH6 336 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 ZNF385AQ96PM9 386 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 TMEM27Q9HBJ8 222 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 CA10Q9NS85 328 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 ADAM21Q9UKJ8 722 aa11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 NUP214P35658 2090 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 FN1P02751 2386 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-205ENST00000535452 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 PDLIM1O00151 329 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 CLIC1O00299 241 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 FRS3O43559 492 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 LMX1BO60663 402 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 SERPINB7O75635 380 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 PDE5AO76074 875 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 LGI1O95970 557 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 SRD5A1P18405 259 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 RPS5P46782 204 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 CLDN17P56750 224 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 BNIP2Q12982 314 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 C11orf71Q6IPW1 123 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 DNM1P46Q6ZS02 220 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 UEVLDQ8IX04 471 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 C10orf53Q8N6V4 93 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 WDR31Q8NA23 367 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 C10orf105Q8TEF2 133 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 HTRA1Q92743 480 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 TEX37Q96LM6 180 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 ASPNQ9BXN1 380 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 LINC00470Q9BZP3 86 aa11.58□□□□□ -0.56
CLSTN3-205ENST00000535452 RCE1Q9Y256 329 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms