RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 EN2P19622 333 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 TACR2P21452 398 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 DPP4P27487 766 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ITPKBP27987 946 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 HTR2AP28223 471 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 DCTDP32321 178 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 GRK5P34947 590 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TIMP3P35625 211 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 GLP1RP43220 463 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 MAGEA12P43365 314 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 RFX5P48382 616 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 ZNF134P52741 427 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 EFNA3P52797 238 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 HCCSP53701 268 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ERVFC1-1P60608 527 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 RAB8AP61006 207 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 LSM6P62312 80 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 SNRPD2P62316 118 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 FOXM1Q08050 763 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TCF15Q12870 199 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PDZK1IP1Q13113 114 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CTBP1Q13363 440 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TSTA3Q13630 321 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 CEACAM7Q14002 265 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SERTAD2Q14140 314 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 JOSD1Q15040 202 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 ARL6IP1Q15041 203 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PGM5Q15124 567 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FAM189A2Q15884 450 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 HSPB2Q16082 182 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PTCHD3Q3KNS1 767 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 MESTQ5EB52 335 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 MTX3Q5HYI7 312 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 C3orf38Q5JPI3 329 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PRAMEF19Q5SWL8 479 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TRIQKQ629K1 86 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FAM45BPQ6NSW5 357 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CES5AQ6NT32 575 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PGBD2Q6P3X8 592 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CRIP3Q6Q6R5 217 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FIGLAQ6QHK4 219 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CLEC9AQ6UXN8 241 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TIFABQ6ZNK6 161 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 MOB3CQ70IA8 216 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TMUB2Q71RG4 321 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SYT13Q7L8C5 426 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 GPR149Q86SP6 731 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 VRK2Q86Y07 508 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SNX29P2Q8IUI4 249 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 KDM8Q8N371 416 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CBR4Q8N4T8 237 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 C12orf76Q8N812 135 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 FRMD1Q8N878 549 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ATP6V1C2Q8NEY4 427 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 OR56A4Q8NGH8 313 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 OR2G2Q8NGZ5 317 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 OR4Q3Q8NH05 313 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 OR51F2Q8NH61 342 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 COQ8AQ8NI60 647 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FAM45AQ8TCE6 357 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PROKR1Q8TCW9 393 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 RNASE8Q8TDE3 154 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 KCNJ9Q92806 393 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 UCN3Q969E3 161 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ARRDC3Q96B67 414 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SLCO4A1Q96BD0 722 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ROPN1LQ96C74 230 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SCRN2Q96FV2 425 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 EEF2KMTQ96G04 330 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PRR11Q96HE9 360 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 MBOAT7Q96N66 472 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ALKBH3Q96Q83 286 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 GAL3ST4Q96RP7 486 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 KLF6Q99612 283 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 OMDQ99983 421 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 C7orf50Q9BRJ6 194 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 UTP23Q9BRU9 249 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 URM1Q9BTM9 101 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 FTHL17Q9BXU8 183 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 SLC29A3Q9BZD2 475 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 IL22Q9GZX6 179 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 MED28Q9H204 178 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 OR2AG1Q9H205 316 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PORCNQ9H237 461 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 LMAN1LQ9HAT1 526 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 ADARB2Q9NS39 739 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 MS4A12Q9NXJ0 267 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 RCC2Q9P258 522 aaKnown RBP5.04□□□□□ -1.6
CD44-236ENST00000533222 PAK5Q9P286 719 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 UPB1Q9UBR1 384 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 COPS7AQ9UBW8 275 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 HSPB7Q9UBY9 170 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 DKKL1Q9UK85 242 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FBXL3Q9UKT7 428 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 FZD1Q9UP38 647 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 CNTN6Q9UQ52 1028 aa5.04□□□□□ -1.6
CD44-236ENST00000533222 PPP1R3CQ9UQK1 317 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms