RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 H0Y8X5 98 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 PYCARD-AS1I3L0S3 204 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 FLRT2O43155 660 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SAGP10523 405 aaPredicted RBP13.05□□□□□ -0.32
USP48-213ENST00000529637 TEAD1P28347 426 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
USP48-213ENST00000529637 SERTAD2Q14140 314 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 THSD4Q6ZMP0 1018 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CCL4L1Q8NHW4 92 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 GIMAP5Q96F15 307 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 PDCD1LG2Q9BQ51 273 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SLC25A18Q9H1K4 315 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SPTBP11277 2137 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 DUXAA6NLW8 204 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 GPR89AB7ZAQ6 455 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SYT5O00445 386 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ABCD4O14678 606 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 RASGRP1O95267 797 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 GPR89BP0CG08 455 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ACHEP22303 614 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 TMEM44Q2T9K0 475 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 FAM69AQ5T7M9 428 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ELP2Q6IA86 826 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ASPGQ86U10 573 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CDH26Q8IXH8 852 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 SLC25A38Q96DW6 304 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 GFI1Q99684 422 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ARHGDIGQ99819 225 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 TMPRSS13Q9BYE2 586 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 EMC3Q9P0I2 261 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ABRACLQ9P1F3 81 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CYB5R1Q9UHQ9 305 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 MOKQ9UQ07 419 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CENPVL1A0A0U1RR11 272 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 HMGN1P05114 100 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 CPN1P15169 458 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 MAOBP27338 520 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 FCRLAQ7L513 359 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 OR4K14Q8NGD5 310 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 PFN4Q8NHR9 129 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
USP48-213ENST00000529637 TAS2R5Q9NYW4 299 aa13.05□□□□□ -0.32
USP48-213ENST00000529637 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
USP48-213ENST00000529637 A0A087WV48 116 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 SIGLEC6O43699 453 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 LDB3O75112 727 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 BMP7P18075 431 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 MAKP20794 623 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 NT5EP21589 574 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 TLX1P31314 330 aaPredicted RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 MC2RQ01718 297 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 MAPK14Q16539 360 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 DUSP5Q16690 384 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 IGSF11Q5DX21 431 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 MFSD12Q6NUT3 480 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 FIGNL1Q6PIW4 674 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 MBOAT2Q6ZWT7 520 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 OR8K3Q8NH51 312 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 OR2M4Q96R27 311 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 NKX6-2Q9C056 277 aaPredicted RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 ADGRL4Q9HBW9 690 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 ST6GALNAC2Q9UJ37 374 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 CTDSPLO15194 276 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 DNAJB6O75190 326 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 OR5F1O95221 314 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 SBK2P0C263 348 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 PRG2P13727 222 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 RPS11P62280 158 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP48-213ENST00000529637 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 DECR1Q16698 335 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 TRMT12Q53H54 448 aaKnown RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 WDR88Q6ZMY6 472 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 GID4Q8IVV7 300 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 SMPDL3BQ92485 455 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 PNPLA2Q96AD5 504 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 ZNF681Q96N22 645 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 MS4A4EQ96PG1 132 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 ZNF304Q9HCX3 659 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 POT1Q9NUX5 634 aa13.04□□□□□ -0.32
USP48-213ENST00000529637 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
USP48-213ENST00000529637 BHLHE40O14503 412 aa13.03□□□□□ -0.32
USP48-213ENST00000529637 LAMP2P13473 410 aa13.03□□□□□ -0.32
USP48-213ENST00000529637 AKR1C2P52895 323 aa13.03□□□□□ -0.32
USP48-213ENST00000529637 NRG3P56975 720 aa13.03□□□□□ -0.32
USP48-213ENST00000529637 AKR1C1Q04828 323 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms