RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 TRIM33Q9UPN9 1127 aa6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 ZNF443Q9Y2A4 671 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC25A15Q9Y619 301 aa6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 GMEB1Q9Y692 573 aa6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 ALPK2Q86TB3 2170 aa6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 MAP1AP78559 2803 aaPredicted RBP6.89□□□□□ -1.31
CCDC90B-212ENST00000529312 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 LOC102725191A0A1B0GVB3 256 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SHISA9B4DS77 424 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ZNF587BE7ETH6 402 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 M0R1B8 84 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 RAMP1O60894 148 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ADAM11O75078 769 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SOD3P08294 240 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ZNF43P17038 809 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 GPX2P18283 190 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 APOBEC3AP31941 199 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ZNF83P51522 516 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 AQP5P55064 265 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 CDH11P55287 796 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 UBE2NP61088 152 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 CDK6Q00534 326 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 TNK1Q13470 666 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 C1DQ13901 141 aaKnown RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 VEZF1Q14119 521 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 AGKQ53H12 422 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 LRIF1Q5T3J3 769 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 GCNT6Q5T4J0 391 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 TSPO2Q5TGU0 170 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 METTL21CQ5VZV1 264 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 HMBOX1Q6NT76 420 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ULK3Q6PHR2 472 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ZNF836Q6ZNA1 936 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 CREB3L2Q70SY1 520 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 DTX2Q86UW9 622 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SNX32Q86XE0 403 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 IL17RDQ8NFM7 739 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 OR52E4Q8NGH9 312 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 TSPEARQ8WU66 669 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC38A4Q969I6 547 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC47A1Q96FL8 570 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 OXGR1Q96P68 337 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 EPYCQ99645 322 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SMR3AQ99954 134 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SIKE1Q9BRV8 207 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 TRAF4Q9BUZ4 470 aaPredicted RBP6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 REG4Q9BYZ8 158 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 AMBRA1Q9C0C7 1298 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC17A5Q9NRA2 495 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ADPRHL2Q9NX46 363 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 CCDC167Q9P0B6 97 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 B3GALT5Q9Y2C3 310 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
CCDC90B-212ENST00000529312 ABCA2Q9BZC7 2435 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 ZC3H12DA2A288 527 aaKnown RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 TRIM64A6NGJ6 449 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 TRIM64BA6NI03 449 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 PDLIM1O00151 329 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 AIM2O14862 343 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 TLX2O43763 284 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 CD8AP01732 235 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 IGHA1P01876 353 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 CRYAAP02489 173 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 C1QCP02747 245 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 NTF4P34130 210 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 SH3BGRP55822 239 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 RBBP4Q09028 425 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 BNIP2Q12982 314 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 SQLEQ14534 574 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 MAPK11Q15759 364 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 PGGHGQ32M88 737 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 FAM69AQ5T7M9 428 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 FAM91A1Q658Y4 838 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 DHRS4L2Q6PKH6 230 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC2A7Q6PXP3 512 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 H1FNTQ75WM6 255 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 MAVSQ7Z434 540 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 SLC30A8Q8IWU4 369 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 CIARTQ8N365 385 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 MUC15Q8N387 334 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 ZIC4Q8N9L1 334 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 WDR31Q8NA23 367 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 OR9I1Q8NGQ6 314 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 OR6S1Q8NH40 331 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 MAGEE2Q8TD90 523 aaPredicted RBP6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 STON2Q8WXE9 905 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 NEUROG1Q92886 237 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 C3orf49Q96BT1 292 aa6.87□□□□□ -1.31
CCDC90B-212ENST00000529312 DNAJA3Q96EY1 480 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms