RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 C1orf140Q5VVS0 124 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 C5orf46Q6UWT4 87 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 ZNF836Q6ZNA1 936 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 GPAT4Q86UL3 456 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 CADM2Q8N3J6 435 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 ZNF525Q8N782 197 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 ZNF540Q8NDQ6 660 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 OR4F15Q8NGB8 312 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 MFSD8Q8NHS3 518 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 SLC38A5Q8WUX1 472 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 DNAJA3Q96EY1 480 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 ZNF385AQ96PM9 386 aaKnown RBP10.35□□□□□ -0.75
SPARC-206ENST00000524277 SLC38A2Q96QD8 506 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 REPIN1Q9BWE0 567 aaKnown RBP10.35□□□□□ -0.75
SPARC-206ENST00000524277 BEX2Q9BXY8 128 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 LINC00470Q9BZP3 86 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 TPT1P8Q9HAU6 139 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 C12orf10Q9HB07 376 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 RLIMQ9NVW2 624 aa10.35□□□□□ -0.75
SPARC-206ENST00000524277 B9A039 149 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 OR2T1O43869 369 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 NPIPB7O75200 414 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 AHSA1O95433 338 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 GKN3PP0CG01 181 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 EPHA3P29320 983 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 SERPINF1P36955 418 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 MVDP53602 400 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 SNRPD2P62316 118 aaKnown RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
SPARC-206ENST00000524277 FADDQ13158 208 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 MAPK11Q15759 364 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 TBRG1Q3YBR2 411 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 NXNQ6DKJ4 435 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 ANKRD16Q6P6B7 361 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 CREB3L2Q70SY1 520 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 NET1Q7Z628 596 aaPredicted RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 VRK2Q86Y07 508 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 OR1K1Q8NGR3 316 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 PNPT1Q8TCS8 783 aaKnown RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 MAELQ96JY0 434 aaKnown RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 WDR55Q9H6Y2 383 aaPredicted RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 BCL2L10Q9HD36 194 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 SDR39U1Q9NRG7 319 aaPredicted RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 ADPRHL2Q9NX46 363 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 RAB21Q9UL25 225 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 MOKQ9UQ07 419 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 RCE1Q9Y256 329 aa10.34□□□□□ -0.75
SPARC-206ENST00000524277 ZNF443Q9Y2A4 671 aaPredicted RBP10.34□□□□□ -0.75
SPARC-206ENST00000524277 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 RPL36A-HNRNPH2H7BZ11 118 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 UBDO15205 165 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 FRS3O43559 492 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 BCHEP06276 602 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 ETFAP13804 333 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 ZNF43P17038 809 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 CDH2P19022 906 aaPredicted RBP10.33□□□□□ -0.76
SPARC-206ENST00000524277 GTF2E2P29084 291 aaKnown RBP10.33□□□□□ -0.76
SPARC-206ENST00000524277 P2RY4P51582 365 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 POLR2JP52435 117 aaKnown RBP10.33□□□□□ -0.76
SPARC-206ENST00000524277 SLC25A3Q00325 362 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 EFNB3Q15768 340 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 MST1LQ2TV78 715 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 ZNF311Q5JNZ3 666 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 ANKRD42Q8N9B4 389 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 IL17RDQ8NFM7 739 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 BCL2L2Q92843 193 aaPredicted RBP10.33□□□□□ -0.76
SPARC-206ENST00000524277 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 FBXO17Q96EF6 278 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 PIMREGQ9BSJ6 248 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 SHARPINQ9H0F6 387 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 MANSC1Q9H8J5 431 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 CA10Q9NS85 328 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 RPS6KB2Q9UBS0 482 aa10.33□□□□□ -0.76
SPARC-206ENST00000524277 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 LOC102725191A0A1B0GVB3 256 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 TMEM120BA0PK00 339 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 VWC2LB2RUY7 222 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 AKAP8O43823 692 aaKnown RBP10.32□□□□□ -0.76
SPARC-206ENST00000524277 LMX1BO60663 402 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 FZD7O75084 574 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 C1QCP02747 245 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 ERCC1P07992 297 aaPredicted RBP10.32□□□□□ -0.76
SPARC-206ENST00000524277 BMP2P12643 396 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 ETS2P15036 469 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 SELENOPP49908 381 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
SPARC-206ENST00000524277 BNIP2Q12982 314 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 MFSD13AQ14CX5 517 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 FAM166AQ6J272 317 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 NIPAL3Q6P499 406 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 C6orf89Q6UWU4 347 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 EPHX4Q8IUS5 362 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 MIER2Q8N344 545 aa10.32□□□□□ -0.76
SPARC-206ENST00000524277 CLIP4Q8N3C7 705 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms