RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 PRICKLE3O43900 615 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 SELENOFO60613 162 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CTNSO60931 367 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MOSPD3O75425 235 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 NDUFB2O95178 105 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CSF1P09603 554 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 UBBP0CG47 229 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 UBCP0CG48 685 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CD96P40200 585 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 RPS27AP62979 156 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 UBA52P62987 128 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MCATQ8IVS2 390 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 GLB1L2Q8IW92 636 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 SDR16C5Q8N3Y7 309 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CDRT4Q8N9R6 151 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 TNFAIP8L1Q8WVP5 186 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MRPS24Q96EL2 167 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 RSPH9Q9H1X1 276 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CYB5R1Q9UHQ9 305 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 TRPM6Q9BX84 2022 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MPTX1A8MV57 137 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 C1QTNF3-AMACRE9PGA6 284 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 H7C417 338 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 PEX12O00623 359 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 GLSO94925 669 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 ADH1CP00326 375 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 P2RY2P41231 377 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CLDN12P56749 244 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 PCGF3Q3KNV8 242 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 ZCCHC12Q6PEW1 402 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 C11orf88Q6PI97 169 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 TSSK4Q6SA08 328 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 TMEM17Q86X19 198 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 PXT1Q8NFP0 134 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 OR52E1Q8NGJ3 308 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 OR52B4Q8NGK2 314 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 OR6N1Q8NGY5 312 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 OR4K13Q8NH42 304 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 GRHL3Q8TE85 626 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 OR1F2PQ96R84 312 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 HDAC8Q9BY41 377 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MFFQ9GZY8 342 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 POLE3Q9NRF9 147 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 MTFP1Q9UDX5 166 aa9.42□□□□□ -0.9
SPIDR-225ENST00000524141 ABT1Q9ULW3 272 aaKnown RBP9.42□□□□□ -0.9
SPIDR-225ENST00000524141 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 GOSR2O14653 212 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 RLN1P04808 185 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 INHAP05111 366 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 VSIG10L2P0DP72 767 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 MPGP29372 298 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 AGTR1P30556 359 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 PSMB10P40306 273 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 ERVFC1P60507 584 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 ZNF425Q6IV72 752 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 STAC2Q6ZMT1 411 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 DGLUCYQ7Z3D6 616 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 TIMM29Q9BSF4 260 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 TEX101Q9BY14 249 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 ADAP2Q9NPF8 381 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 EXOSC3Q9NQT5 275 aaKnown RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 KCNE5Q9UJ90 142 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 A0A087WV62 115 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 A0A1B0GWA3 101 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 XRCC3O43542 346 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 FGF18O76093 207 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 KDM4BO94953 1096 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 SPDEFO95238 335 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 CXCL14O95715 111 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 FCER2P06734 321 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 RHOP08100 348 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 TACSTD2P09758 323 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 CPMP14384 443 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 EPCAMP16422 314 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 MGMTP16455 207 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 RPS15AP62244 130 aaKnown RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 IRF4Q15306 451 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 RPE65Q16518 533 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 Q499Y3 187 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 EXOSC6Q5RKV6 272 aaKnown RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 USP53Q70EK8 1073 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 C12orf40Q86WS4 652 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 DND1Q8IYX4 353 aaKnown RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 OR51L1Q8NGJ5 315 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 NXPE3Q969Y0 559 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 WDR89Q96FK6 387 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 NPAS1Q99742 590 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 TMEM138Q9NPI0 162 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 C2orf42Q9NWW7 574 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
SPIDR-225ENST00000524141 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-225ENST00000524141 BRINP1O60477 761 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms