RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 MVDP53602 400 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 SH3BGRP55822 239 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 SPOCK1Q08629 439 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 C1DQ13901 141 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 RAB35Q15286 201 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 RGNQ15493 299 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 GTDC1Q4AE62 458 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 TSPO2Q5TGU0 170 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 AGBL2Q5U5Z8 902 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 HMBOX1Q6NT76 420 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 EPGNQ6UW88 154 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 MAVSQ7Z434 540 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 SERPINA11Q86U17 422 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 TMEM99Q8N816 258 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 NANOS1Q8WY41 292 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 C3orf49Q96BT1 292 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 CACNG6Q9BXT2 260 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 C12orf10Q9HB07 376 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 BCL2L10Q9HD36 194 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 SLC7A10Q9NS82 523 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 SLC6A13Q9NSD5 602 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 TMEM45AQ9NWC5 275 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 RCE1Q9Y256 329 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 B3GALT5Q9Y2C3 310 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 FKBP7Q9Y680 259 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 PMF1-BGLAPU3KQ54 211 aa7.78□□□□□ -1.16
CTNNA1-240ENST00000523912 PRORSD1PA6NEY8 169 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 EVPLLA8MZ36 301 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 E7EQL1 145 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 H7C417 338 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 AIM2O14862 343 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 TLX2O43763 284 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 OR2T1O43869 369 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SSX4O60224 188 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 CD8AP01732 235 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ZNF43P17038 809 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 CDH2P19022 906 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SNRPD2P62316 118 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 IL1RL1Q01638 556 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 BNIP2Q12982 314 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 MFSD13AQ14CX5 517 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 MAPK11Q15759 364 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 REEP3Q6NUK4 255 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 NIPAL3Q6P499 406 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC2A7Q6PXP3 512 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 HDXQ7Z353 690 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 CLIP4Q8N3C7 705 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 DNAJA4Q8WW22 397 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC38A4Q969I6 547 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 MAL2Q969L2 176 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC25A36Q96CQ1 311 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 SPDL1Q96EA4 605 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ZNF385AQ96PM9 386 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ALKBH3Q96Q83 286 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ZNF607Q96SK3 696 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 EPYCQ99645 322 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 CCDC28BQ9BUN5 200 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 C1QTNF6Q9BXI9 259 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 RABEP2Q9H5N1 569 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 EVA1AQ9H8M9 152 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 VIPAS39Q9H9C1 493 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ADAM21Q9UKJ8 722 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ANGPT4Q9Y264 503 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 PCDHB14Q9Y5E9 798 aa7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 CHD3Q12873 2000 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-240ENST00000523912 ALPK2Q86TB3 2170 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 VSTM5A8MXK1 200 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 ATP6V1G2-DDX39BF2Z307 99 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 CD5LO43866 347 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 NPIPB7O75200 414 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC43A1O75387 559 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 SERPINB7O75635 380 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 LGI1O95970 557 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 IFNA2P01563 188 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 CRYAAP02489 173 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 NUDT7P0C024 238 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 BMP2P12643 396 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 PRG2P13727 222 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC25A16P16260 332 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 SLC6A2P23975 617 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 APOBEC3AP31941 199 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 NTF4P34130 210 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 ATP4BP51164 291 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 AQP5P55064 265 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 RGS8P57771 180 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 CDK6Q00534 326 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 SQLEQ14534 574 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 TBRG1Q3YBR2 411 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 HIKESHIQ53FT3 197 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 FAM69AQ5T7M9 428 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 C11orf71Q6IPW1 123 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 DHRS4L2Q6PKH6 230 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 C6orf89Q6UWU4 347 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 B3GLCTQ6Y288 498 aa7.76□□□□□ -1.17
CTNNA1-240ENST00000523912 CREB3L2Q70SY1 520 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms