RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 BPIFA2Q96DR5 249 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OTUB1Q96FW1 271 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CELF6Q96J87 481 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF354BQ96LW1 612 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TRIB1Q96RU8 372 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF382Q96SR6 550 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TSNAXQ99598 290 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CCDC3Q9BQI4 270 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 NHEJ1Q9H9Q4 299 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF160Q9HCG1 818 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR2S2Q9NQN1 319 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TM7SF3Q9NS93 570 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 SIDT1Q9NXL6 827 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 HAO2Q9NYQ3 351 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 PLA2G3Q9NZ20 509 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 THAP10Q9P2Z0 257 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 PILRBQ9UKJ0 227 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 PPIEQ9UNP9 301 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 MUC22E2RYF6 1773 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CACNA1BQ00975 2339 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 A0A0A6YYC8 382 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 IGHV1OR15-9A0A0B4J2B8 117 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 TRBV7-9A0A0J9YWB2 115 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 TRBV11-1A0A0K0K1C0 115 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 A0A1W2PQF6 199 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 DCDC2BA2VCK2 349 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 YJEFN3A6XGL0 299 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 C5orf58C9J3I9 102 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 H3BN98 237 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SMLR1H3BR10 107 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 I3L1I5 382 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 TM4SF5O14894 197 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CYB5BO43169 146 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 PHGDHO43175 533 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF749O43361 778 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RGS14O43566 566 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 KLK8O60259 260 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RP2O75695 350 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SLCO2B1O94956 709 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MOCS3O95396 460 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CBX6O95503 412 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 C6orf47O95873 294 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 TGFB1P01137 390 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 IGLV3-19P01714 112 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 IGLV3-27P01718 113 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 TCRBP04435 133 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 HMBSP08397 361 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 BMP4P12644 408 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CD22P20273 847 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RPL10P27635 214 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CD82P27701 267 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CEACAM3P40198 252 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 AKR1C3P42330 323 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RPL34P49207 117 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 PGFP49763 221 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 HERV-K104P63124 156 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 DLK1P80370 383 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MRPS10P82664 201 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SHC2P98077 582 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 IRF3Q14653 427 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 FCN2Q15485 313 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MAN2A1Q16706 1144 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 ARSJQ5FYB0 599 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RAET1LQ5VY80 246 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 STEAP4Q687X5 459 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 LRRC8EQ6NSJ5 796 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF774Q6NX45 483 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SERPINA13PQ6UXR4 307 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 ADCK2Q7Z695 626 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 KCNMB4Q86W47 210 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MMP21Q8N119 569 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 HJURPQ8NCD3 748 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 BPIFB6Q8NFQ5 453 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SORCS1Q8WY21 1168 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 GAL3ST3Q96A11 431 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CMTM5Q96DZ9 223 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MOCOSQ96EN8 888 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 FBXL20Q96IG2 436 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 AKR1E2Q96JD6 320 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 OR2M2Q96R28 347 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 KCNK17Q96T54 332 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 NPY6RQ99463 290 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 C1QTNF2Q9BXJ5 285 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 BEX2Q9BXY8 128 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 CIPCQ9C0C6 399 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 HRH4Q9H3N8 390 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 DHX35Q9H5Z1 703 aaKnown RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 MED20Q9H944 212 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 AGPAT4Q9NRZ5 378 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 FAM207AQ9NSI2 230 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-216ENST00000523088 SERTAD3Q9UJW9 196 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 ADAM29Q9UKF5 820 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 NUDT5Q9UKK9 219 aa6.93□□□□□ -1.3
HDAC3-216ENST00000523088 RASD1Q9Y272 281 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms