RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 IGHV4-61A0A0C4DH41 118 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 LOC100289279A0A1B0GTE1 492 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 ZNF587BE7ETH6 402 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 FAAHO00519 579 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 TM9SF1O15321 606 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 SEC14L2O76054 403 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 ANP32DO95626 131 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 CBLP22681 906 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 P2RY4P51582 365 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 DSTNP60981 165 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 UBE2NP61088 152 aaKnown RBP13.43□□□□□ -0.26
MRPS28-209ENST00000522987 COPZ1P61923 177 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 SNRPD2P62316 118 aaKnown RBP13.43□□□□□ -0.26
MRPS28-209ENST00000522987 IQCCQ4KMZ1 466 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 LIN52Q52LA3 116 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 HHATQ5VTY9 493 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 C1orf140Q5VVS0 124 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 WBP2NLQ6ICG8 309 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 CREB3L2Q70SY1 520 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 MYPOPQ86VE0 399 aaPredicted RBP13.43□□□□□ -0.26
MRPS28-209ENST00000522987 ZCCHC24Q8N2G6 241 aaKnown RBP13.43□□□□□ -0.26
MRPS28-209ENST00000522987 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 PROX1Q92786 737 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 MSI2Q96DH6 328 aaKnown RBP13.43□□□□□ -0.26
MRPS28-209ENST00000522987 TMEM19Q96HH6 336 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 PIMREGQ9BSJ6 248 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 HAO1Q9UJM8 370 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 FKBP7Q9Y680 259 aa13.43□□□□□ -0.26
MRPS28-209ENST00000522987 A8MVM7 634 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 VWC2LB2RUY7 222 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 KRT75O95678 551 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CSF3P09919 207 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 OR4A8P0C604 315 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CECR9P0C854 216 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 APEHP13798 732 aaKnown RBP13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CALCRP30988 508 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 SERPINF1P36955 418 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 NR4A2P43354 598 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 RPS5P46782 204 aaKnown RBP13.42□□□□□ -0.26
MRPS28-209ENST00000522987 MVDP53602 400 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CLDN17P56750 224 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 EPHX4Q8IUS5 362 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 ZNF440Q8IYI8 595 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 OR9I1Q8NGQ6 314 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 SLC38A5Q8WUX1 472 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 BCL2L2Q92843 193 aaPredicted RBP13.42□□□□□ -0.26
MRPS28-209ENST00000522987 VPS33AQ96AX1 596 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 SOX7Q9BT81 388 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 SF3B5Q9BWJ5 86 aaKnown RBP13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CA10Q9NS85 328 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 KCNS2Q9ULS6 477 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 CHST2Q9Y4C5 530 aa13.42□□□□□ -0.26
MRPS28-209ENST00000522987 SH3PXD2BA1X283 911 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 LRP5LA4QPB2 252 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 CRYAAP02489 173 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 NUDT7P0C024 238 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 SRD5A1P18405 259 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 GZMKP49863 264 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 WDR4P57081 412 aaKnown RBP13.41□□□□□ -0.26
MRPS28-209ENST00000522987 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
MRPS28-209ENST00000522987 IL1RL1Q01638 556 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
MRPS28-209ENST00000522987 NAAAQ02083 359 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 NPRL3Q12980 569 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 ADIPOQQ15848 244 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 GSTA3Q16772 222 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 FAM166AQ6J272 317 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 WDR93Q6P2C0 686 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 ANKRD16Q6P6B7 361 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 ABHD12BQ7Z5M8 362 aaPredicted RBP13.41□□□□□ -0.26
MRPS28-209ENST00000522987 MAL2Q969L2 176 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 BPESC1Q9GZL8 116 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 NELFAQ9H3P2 528 aa13.41□□□□□ -0.26
MRPS28-209ENST00000522987 SSU72Q9NP77 194 aaKnown RBP13.41□□□□□ -0.26
MRPS28-209ENST00000522987 DSPPQ9NZW4 1301 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 HDAC3O15379 428 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 SLC22A3O75751 556 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 AHSA1O95433 338 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 TGFAP01135 160 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 TFPTP0C1Z6 253 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 PNMTP11086 282 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 IDH3GP51553 393 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-209ENST00000522987 CRISP3P54108 245 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 LARS2Q15031 903 aaKnown RBP13.4□□□□□ -0.26
MRPS28-209ENST00000522987 SVOPLQ8N434 492 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 MREGQ8N565 214 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 ZNF837Q96EG3 531 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-209ENST00000522987 KTI12Q96EK9 354 aaPredicted RBP13.4□□□□□ -0.26
MRPS28-209ENST00000522987 C19orf24Q9BVV8 132 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 PARD6BQ9BYG5 372 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
MRPS28-209ENST00000522987 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 TMEM229AB2RXF0 380 aa13.39□□□□□ -0.27
MRPS28-209ENST00000522987 GTF2E2P29084 291 aaKnown RBP13.39□□□□□ -0.27
MRPS28-209ENST00000522987 THBS4P35443 961 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms