RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CD1CP29017 333 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 EIF1P41567 113 aaKnown RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 POLR2HP52434 150 aaKnown RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 ELAVL1Q15717 326 aaKnown RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 FRMPD2BQ6IN97 320 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 PODNL1Q6PEZ8 512 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 SLC2A12Q8TD20 617 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 DUSP19Q8WTR2 217 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 NEURL3Q96EH8 262 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 HCAR1Q9BXC0 346 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 CSNK1G3Q9Y6M4 447 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 SLC16A6O15403 523 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 LALBAP00709 142 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 MZT1Q08AG7 82 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 RSU1Q15404 277 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ULBP2Q9BZM5 246 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 GLIPR2Q9H4G4 154 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 KIAA1551Q9HCM1 1747 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ZNF736B4DX44 427 aaPredicted RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 TXNL1O43396 289 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 MRPL33O75394 65 aaKnown RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 RAB3AP20336 220 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 GABRA5P31644 462 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 AVPI1Q5T686 147 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 AGBL4Q5VU57 503 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 NGBQ9NPG2 151 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ASIC5Q9NY37 505 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 METTL15A6NJ78 407 aa15□□□□□ -0.01
USP42-207ENST00000521713 MAS1P04201 325 aa15□□□□□ -0.01
USP42-207ENST00000521713 TMEM225BP0DP42 221 aa15□□□□□ -0.01
USP42-207ENST00000521713 ARSBP15848 533 aa15□□□□□ -0.01
USP42-207ENST00000521713 GLB1P16278 677 aa15□□□□□ -0.01
USP42-207ENST00000521713 EPHA5P54756 1037 aa15□□□□□ -0.01
USP42-207ENST00000521713 TMEM176BQ3YBM2 270 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 LIMS2Q7Z4I7 341 aa15□□□□□ -0.01
USP42-207ENST00000521713 KMT5CQ86Y97 462 aa15□□□□□ -0.01
USP42-207ENST00000521713 CCDC71Q8IV32 467 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 LAS2Q8IYD9 372 aa15□□□□□ -0.01
USP42-207ENST00000521713 SAP130Q9H0E3 1048 aa15□□□□□ -0.01
USP42-207ENST00000521713 KCNIP1Q9NZI2 227 aa15□□□□□ -0.01
USP42-207ENST00000521713 LAMB2P55268 1798 aa15□□□□□ -0.01
USP42-207ENST00000521713 NUMA1Q14980 2115 aa15□□□□□ -0.01
USP42-207ENST00000521713 LRIT2A6NDA9 550 aa15□□□□□ -0.01
USP42-207ENST00000521713 SYT5O00445 386 aa15□□□□□ -0.01
USP42-207ENST00000521713 ACOT8O14734 319 aa15□□□□□ -0.01
USP42-207ENST00000521713 SSTR4P31391 388 aa15□□□□□ -0.01
USP42-207ENST00000521713 TAS2R20P59543 309 aa15□□□□□ -0.01
USP42-207ENST00000521713 STK11Q15831 433 aa15□□□□□ -0.01
USP42-207ENST00000521713 FAM71E1Q6IPT2 247 aa15□□□□□ -0.01
USP42-207ENST00000521713 SDR9C7Q8NEX9 313 aa15□□□□□ -0.01
USP42-207ENST00000521713 OR2T11Q8NH01 316 aa15□□□□□ -0.01
USP42-207ENST00000521713 SLC38A5Q8WUX1 472 aa15□□□□□ -0.01
USP42-207ENST00000521713 SENP5Q96HI0 755 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 ZNF419Q96HQ0 510 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 IER2Q9BTL4 223 aa15□□□□□ -0.01
USP42-207ENST00000521713 PSORS1C1Q9UIG5 152 aa15□□□□□ -0.01
USP42-207ENST00000521713 MRPS2Q9Y399 296 aaKnown RBP15□□□□□ -0.01
USP42-207ENST00000521713 WIF1Q9Y5W5 379 aa15□□□□□ -0.01
USP42-207ENST00000521713 OLFM2O95897 454 aa15□□□□□ -0.01
USP42-207ENST00000521713 ACP2P11117 423 aa15□□□□□ -0.01
USP42-207ENST00000521713 TRHRP34981 398 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 PDE7AQ13946 482 aa15□□□□□ -0.01
USP42-207ENST00000521713 BOLLQ8N9W6 283 aaKnown RBP15□□□□□ -0.01
USP42-207ENST00000521713 GPR148Q8TDV2 347 aa15□□□□□ -0.01
USP42-207ENST00000521713 NTN4Q9HB63 628 aa15□□□□□ -0.01
USP42-207ENST00000521713 CDHR4A6H8M9 788 aa15□□□□□ -0.01
USP42-207ENST00000521713 F5H5K5 113 aa15□□□□□ -0.01
USP42-207ENST00000521713 PTHP01270 115 aa15□□□□□ -0.01
USP42-207ENST00000521713 NFYAP23511 347 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 BTG1P62324 171 aa15□□□□□ -0.01
USP42-207ENST00000521713 POU3F1Q03052 451 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 ZNF169Q14929 603 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 PPA1Q15181 289 aa15□□□□□ -0.01
USP42-207ENST00000521713 BCL2A1Q16548 175 aa15□□□□□ -0.01
USP42-207ENST00000521713 CLVS2Q5SYC1 327 aa15□□□□□ -0.01
USP42-207ENST00000521713 SLC6A19Q695T7 634 aa15□□□□□ -0.01
USP42-207ENST00000521713 ZNF546Q86UE3 836 aa15□□□□□ -0.01
USP42-207ENST00000521713 OR5L1Q8NGL2 311 aa15□□□□□ -0.01
USP42-207ENST00000521713 MYEOVQ96EZ4 313 aa15□□□□□ -0.01
USP42-207ENST00000521713 SLC25A44Q96H78 314 aaPredicted RBP15□□□□□ -0.01
USP42-207ENST00000521713 OR10A2Q9H208 303 aa15□□□□□ -0.01
USP42-207ENST00000521713 ZNF226Q9NYT6 803 aa15□□□□□ -0.01
USP42-207ENST00000521713 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
USP42-207ENST00000521713 SHISA7A6NL88 538 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 POU2F2P09086 479 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 C21orf33P30042 268 aaPredicted RBP14.99□□□□□ -0.01
USP42-207ENST00000521713 ZNF585AQ6P3V2 769 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 CFAP77Q6ZQR2 320 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 PTRH1Q86Y79 214 aaKnown RBP14.99□□□□□ -0.01
USP42-207ENST00000521713 CADM3Q8N126 398 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 FOXRED1Q96CU9 486 aaPredicted RBP14.99□□□□□ -0.01
USP42-207ENST00000521713 MVB12AQ96EY5 273 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 LINC00615Q96LM1 132 aaPredicted RBP14.99□□□□□ -0.01
USP42-207ENST00000521713 FAM86C1Q9NVL1 165 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 TRBV5-4A0A0C4DH59 114 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 FAM171A2A8MVW0 826 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 SCG5P05408 212 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 DPP4P27487 766 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 CAPZBP47756 277 aa14.99□□□□□ -0.01
USP42-207ENST00000521713 SLC35A1P78382 337 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms