RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GABARAPO95166 117 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 DDX58O95786 925 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 LGI1O95970 557 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 IGSF6O95976 241 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 GCAP28676 217 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 CTNNA1P35221 906 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 GYG1P46976 350 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 OR1G1P47890 313 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 GMPSP49915 693 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 PICALMQ13492 652 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 EXOSC2Q13868 293 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 ADPRMQ3LIE5 342 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 ACAD10Q6JQN1 1059 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 PRSS54Q6PEW0 395 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 SLC16A13Q7RTY0 426 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 MIER3Q7Z3K6 550 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 MYLK4Q86YV6 388 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 NRMQ8IXM6 262 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 CCAR2Q8N163 923 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 STK40Q8N2I9 435 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 EIF4E3Q8N5X7 224 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 ZNF713Q8N859 430 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 UXS1Q8NBZ7 420 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 OR4C13Q8NGP0 309 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 PAQR8Q8TEZ7 354 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 TRUB1Q8WWH5 349 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 SLC5A11Q8WWX8 675 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 LRRC3BQ96PB8 259 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 HIGD2AQ9BW72 106 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 C20orf85Q9H1P6 137 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 SIAEQ9HAT2 523 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 C21orf62Q9NYP8 219 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 SUCLA2Q9P2R7 463 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 FETUBQ9UGM5 382 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 TCEAL9Q9UHQ7 104 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 PLA2G4CQ9UP65 541 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 KLF13Q9Y2Y9 288 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 AK9Q5TCS8 1911 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 DENND4CQ5VZ89 1909 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 YLPM1P49750 1951 aaKnown RBP-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 SVEP1Q4LDE5 3571 aa-1.9□□□□□ -2.71
RNU6-542P-201ENST00000516405 IGKV1D-8A0A087WSZ0 117 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 A0A0G2JQZ4 141 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 A0A1W2PQL4 384 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 TTC26A0AVF1 554 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 M0R296 226 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 SH2D1BO14796 132 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 AGPAT2O15120 278 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 LUC7L3O95232 432 aaKnown RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ETHE1O95571 254 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 IGHG2P01859 326 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 IGHG4P01861 327 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ANKRD34CP0C6C1 535 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CSH1P0DML2 217 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CSH2P0DML3 217 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 IGHV3-43DP0DP04 118 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF708P17019 499 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ATP6V1B2P21281 511 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ME2P23368 584 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CXCR2P25025 360 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 SOX6P35712 828 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CYB561P49447 251 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 FGF8P55075 233 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF92Q03936 586 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 GABPAQ06546 454 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 BNIP1Q12981 228 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CRYMQ14894 314 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 TPRXLQ17RH7 258 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 RNASE13Q5GAN3 156 aaKnown RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 PVRIGQ6DKI7 326 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 C1orf228Q6PIY5 440 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 PGAP1Q75T13 922 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 MCUQ8NE86 351 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR10G3Q8NGC4 313 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR10D4PQ8NGN7 298 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 OR6N1Q8NGY5 312 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 SPATA18Q8TC71 538 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF622Q969S3 477 aaKnown RBP eCLIP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZUFSPQ96AP4 578 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF488Q96MN9 340 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ZNF681Q96N22 645 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 S1PR3Q99500 378 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 RAB17Q9H0T7 212 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 SRMSQ9H3Y6 488 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 C1orf198Q9H425 327 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CTSFQ9UBX1 484 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 DDX25Q9UHL0 483 aaKnown RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CTNNA3Q9UI47 895 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 PURGQ9UJV8 347 aaKnown RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 ARHGAP26Q9UNA1 814 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 PTRH2Q9Y3E5 179 aaKnown RBP-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 BSNQ9UPA5 3926 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 CLUHO75153 1309 aa-1.91□□□□□ -2.72
RNU6-542P-201ENST00000516405 IGHV1-3A0A0C4DH29 117 aa-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 LRIT2A6NDA9 550 aa-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 A8MXQ7 604 aa-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 PRAMEF26H0Y7S4 382 aa-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 CLDN34H7C241 214 aa-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 EIF3FO00303 357 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-542P-201ENST00000516405 CTDSP2O14595 271 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms